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MN908687.1__QIG58210.1__SEA_SKOG_58__00058

Bact-Vir

MN908687.1__QIG58210.1__SEA_SKOG_58__00058

Identity

Accession:
MN908687 ↗
Kingdom:
phage

Quality

48.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-59
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24024.2 best DUF7336 35.2 1.10e-08 96.4% 51.7%
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1pzxA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.77 55.0 4.23e-01 76.4% 79.5%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.74 55.0 4.30e-01 100.0% 37.6%
1x4xA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 51.0 4.15e-01 100.0% 41.5%
1djsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 56.0 4.64e-01 100.0% 50.0%
4p2qE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 58.0 4.54e-01 100.0% 57.8%
5d2lE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 57.0 4.62e-01 100.0% 59.3%
4pjeE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 58.0 4.66e-01 100.0% 58.3%
4fixA01 3.90.550.60 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.65 56.0 3.35e-01 100.0% 13.2%
3o4lD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 57.0 4.63e-01 100.0% 62.5%
3dn7A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 50.0 3.65e-01 100.0% 31.7%
1ypzF01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 56.0 4.37e-01 100.0% 55.3%
2hhpA03 3.30.70.590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain 0.65 54.0 4.06e-01 100.0% 89.4%
8shiI01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 56.0 4.60e-01 100.0% 61.5%
5vqfD01 2.60.120.970 Mainly Beta › Sandwich › Jelly Rolls › 0.64 56.0 3.73e-01 100.0% 31.4%
1bd2E01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 55.0 4.41e-01 100.0% 59.3%
3rpiB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 56.0 4.66e-01 100.0% 63.3%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.63 53.0 3.84e-01 98.2% 90.4%
4jb9H01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 54.0 4.16e-01 100.0% 58.0%
1lxnA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 54.0 4.50e-01 98.2% 81.6%
1hqz800 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.62 48.0 3.61e-01 98.2% 34.8%
3omzA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 53.0 4.41e-01 100.0% 65.0%
1jhjA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 52.0 3.75e-01 100.0% 32.3%
7mxdX01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 53.0 4.19e-01 100.0% 58.0%
6kxkG01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.61 52.0 3.96e-01 100.0% 39.8%
2mv2A00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.61 49.0 3.68e-01 100.0% 33.8%
3nd1A02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.61 48.0 3.94e-01 100.0% 45.5%
2ipiA02 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.61 50.0 3.37e-01 100.0% 39.1%
6xaxA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 46.0 4.07e-01 100.0% 55.3%
8ezmH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 52.0 4.19e-01 100.0% 59.8%
6a6yA00 2.60.40.1490 Mainly Beta › Sandwich › Immunoglobulin-like › Histone chaperone ASF1-like 0.60 54.0 3.89e-01 100.0% 40.1%
1alyA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 52.0 3.88e-01 100.0% 37.7%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.60 47.0 4.54e-01 100.0% 75.8%
6p3xB01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.60 49.0 3.60e-01 100.0% 57.1%
2j3wC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.60 43.0 3.36e-01 78.2% 80.0%
3k4zA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 51.0 3.73e-01 100.0% 37.0%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.60 50.0 4.32e-01 98.2% 58.7%
1hxmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 52.0 4.09e-01 100.0% 52.9%
1guiA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 50.0 3.70e-01 100.0% 34.8%
7o85C01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 49.0 4.44e-01 94.5% 85.7%
1dg6A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 52.0 3.82e-01 100.0% 38.3%
4nx9A02 2.60.40.4390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 48.0 3.92e-01 100.0% 64.5%
3kl0D01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 42.0 3.48e-01 100.0% 40.6%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.58 48.0 4.19e-01 100.0% 58.5%
2npnA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.58 45.0 3.79e-01 100.0% 46.8%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.57 47.0 3.91e-01 100.0% 50.5%
3fw6A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 41.0 3.32e-01 100.0% 37.6%
1ywlA00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.56 46.0 3.95e-01 100.0% 56.2%
3nyiB01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 40.0 3.09e-01 83.6% 84.1%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.56 44.0 3.92e-01 100.0% 63.5%
4wsfA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 48.0 3.85e-01 100.0% 74.8%
6gszA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 3.64e-01 100.0% 50.0%
1js8B02 2.60.310.10 Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › Haemocyanin C-terminal domain 0.54 45.0 3.80e-01 100.0% 61.0%
1wapA00 2.60.40.50 Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like 0.54 46.0 4.35e-01 100.0% 86.8%
3wqbA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 46.0 3.35e-01 100.0% 60.8%
3au4A02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.54 43.0 3.81e-01 100.0% 67.0%
4pqqA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 45.0 3.30e-01 100.0% 34.0%
1j5yA02 3.30.1340.20 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 3H domain 0.53 42.0 3.62e-01 100.0% 80.4%
2h6cA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 38.0 3.05e-01 96.4% 34.1%
2qsdB02 3.50.100.10 Alpha Beta › 3-Layer(bba) Sandwich › protein il1583 fold › protein il1583 domain 0.53 36.0 3.30e-01 100.0% 51.3%
2kd7A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 44.0 3.27e-01 98.2% 52.2%
4lplA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 44.0 3.38e-01 100.0% 38.7%
7tzeA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.54e-01 100.0% 63.3%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.39e-01 100.0% 47.3%
2yrbA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 40.0 3.26e-01 100.0% 100.0%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3285401 3986.2.1.0 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.70 60.0 5.37e-01 100.0% 69.3%
4448678 4.1.1.307 beta barrels › SH3 › SH3 › SH3 › PF26132 0.69 59.0 5.37e-01 98.2% 100.0%
3996685 224.1.1.1 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF 0.68 53.0 4.05e-01 98.2% 35.3%
3386915 304.110.1.1 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.68 59.0 4.88e-01 100.0% 77.0%
3517012 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.66 48.0 3.76e-01 100.0% 35.2%
4884122 304.56.1.0 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.66 57.0 4.67e-01 100.0% 78.3%
3671921 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.65 49.0 4.92e-01 89.1% 80.0%
3534565 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.64 46.0 3.94e-01 100.0% 46.3%
4972691 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.63 54.0 4.49e-01 98.2% 77.0%
3741114 223.2.1.29 a+b three layers › Profilin-like › profilin-like › profilin-like › DENND11 0.62 44.0 3.16e-01 74.5% 31.9%
5070409 821.1.1.0 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.62 53.0 4.59e-01 98.2% 64.8%
4105434 2492.1.1.7 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ 0.61 51.0 3.81e-01 98.2% 46.1%
3880104 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.61 47.0 4.00e-01 100.0% 50.5%
5061835 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 52.0 3.83e-01 100.0% 34.8%
5017434 304.110.1.1 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.60 50.0 4.22e-01 100.0% 73.3%
3975133 11.1.1.210 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZirS_C 0.60 52.0 4.01e-01 100.0% 46.2%
3615237 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.60 52.0 3.17e-01 100.0% 16.7%
5030770 821.1.1.0 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.60 50.0 4.23e-01 98.2% 55.8%
5020151 2492.1.1.7 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ 0.59 49.0 3.81e-01 98.2% 52.6%
3172638 223.2.1.29 a+b three layers › Profilin-like › profilin-like › profilin-like › DENND11 0.58 40.0 2.83e-01 70.9% 78.4%
5044703 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 40.0 3.26e-01 76.4% 55.8%
4942296 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.58 50.0 4.06e-01 100.0% 51.4%
3940520 223.2.1.34 a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 0.58 42.0 3.14e-01 80.0% 76.1%
5053322 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 40.0 3.10e-01 76.4% 76.6%
5037161 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 49.0 3.93e-01 100.0% 53.0%
3244287 223.2.1.34 a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 0.57 40.0 2.93e-01 74.5% 69.4%
3168866 223.2.1.34 a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 0.56 42.0 3.06e-01 80.0% 76.8%
3584409 223.2.1.34 a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 0.56 41.0 2.98e-01 80.0% 74.7%
3574420 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 39.0 3.02e-01 81.8% 38.7%
3969006 3115.6.1.2 a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.55 41.0 4.37e-01 98.2% 100.0%
3407846 221.1.1.76 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.55 46.0 3.91e-01 100.0% 65.0%
5018703 815.1.1.0 a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 0.55 43.0 3.87e-01 100.0% 58.9%
4018289 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.55 46.0 3.48e-01 98.2% 45.5%
5051461 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 43.0 3.07e-01 87.3% 83.5%
4033537 1119.1.1.1 a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.54 43.0 3.02e-01 100.0% 24.3%
3223282 223.2.1.22 a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin 0.53 47.0 3.31e-01 100.0% 51.2%
4943663 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 47.0 3.40e-01 100.0% 52.3%
4947810 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 35.0 2.90e-01 70.9% 41.7%
3190078 223.2.1.25 a+b three layers › Profilin-like › profilin-like › profilin-like › Avl9 0.53 46.0 3.24e-01 100.0% 64.0%
5049631 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 46.0 3.44e-01 100.0% 67.9%
5049138 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 37.0 2.94e-01 78.2% 40.0%
5052820 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 45.0 3.11e-01 100.0% 48.4%
3241603 223.2.1.37 a+b three layers › Profilin-like › profilin-like › profilin-like › C9orf72-like 0.51 45.0 3.20e-01 100.0% 52.7%
3514322 223.2.1.37 a+b three layers › Profilin-like › profilin-like › profilin-like › C9orf72-like 0.51 44.0 3.16e-01 100.0% 49.1%
3260215 223.2.1.22 a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin 0.51 45.0 3.00e-01 100.0% 46.5%
3786765 223.2.1.25 a+b three layers › Profilin-like › profilin-like › profilin-like › Avl9 0.50 43.0 3.10e-01 100.0% 70.9%