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MN908687.1__QIG58224.1__SEA_SKOG_72__00072

Bact-Vir

MN908687.1__QIG58224.1__SEA_SKOG_72__00072

Identity

Accession:
MN908687 ↗
Kingdom:
phage

Quality

62.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Skogvirus› Gordonia_phage_Skog

TaxID: 2704033

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-65
PDB
D2 high residues 88-187
PDB
Domain cluster: rep: SR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00096__D3-105
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kvpA00 6.20.140.10 Special › Other non-globular › Immunoglobulin-like › 0.67 28.0 4.18e-01 71.0% 93.0%
2yugA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.58 47.0 4.06e-01 87.0% 71.6%
2x3hA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.56 28.0 1.83e-01 70.0% 9.2%
6lf2B01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 44.0 4.08e-01 85.0% 85.5%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 34.0 3.42e-01 95.0% 59.6%
4hfsA00 2.60.120.1270 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.57e-01 98.0% 54.2%
3uv0B00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.51 36.0 3.71e-01 87.0% 76.8%
1mufA01 2.20.110.10 Mainly Beta › Single Sheet › Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain › Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 0.51 39.0 3.75e-01 85.0% 71.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3216450 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.60 40.0 3.55e-01 84.0% 45.3%
3996204 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 32.0 3.09e-01 77.0% 45.0%
3443169 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.52 44.0 3.77e-01 95.0% 71.2%
3805158 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.51 43.0 4.31e-01 99.0% 90.5%