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MN908687.1QIG58263.1SEA_SKOG_111__00111

Bact-Vir

MN908687.1__QIG58263.1__SEA_SKOG_111__00111

Identity

Accession:: MN908687 ↗
Kingdom:: phage

Quality

71.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Skogvirus› Gordonia_phage_Skog

TaxID: 2704033

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 42-147

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7afrX02	2.30.30.180	Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain	0.79	44.0	5.69e-01	84.0%	96.7%
2lccA00	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.66	39.0	4.50e-01	97.2%	81.6%
4iupA02	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.63	41.0	4.81e-01	80.2%	97.2%
2db9A01	3.90.70.200	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Plus-3 domain	0.57	42.0	3.91e-01	76.4%	85.0%
4r8tB02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.52	29.0	3.38e-01	80.2%	78.1%

ECOD (23)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4668960	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.71	50.0	4.98e-01	79.2%	70.0%
4674170	4.1.1.17 ↗	beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19	0.71	50.0	4.85e-01	79.2%	65.0%
4400596	4.1.1.17 ↗	beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19	0.70	51.0	4.41e-01	79.2%	50.0%
4063634	4.1.1.17 ↗	beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19	0.69	50.0	4.77e-01	80.2%	64.5%
4607738	4.1.1.17 ↗	beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19	0.68	48.0	4.78e-01	79.2%	70.0%
3241067	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.68	43.0	4.26e-01	73.6%	60.9%
3709279	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.67	45.0	4.83e-01	76.4%	80.0%
4961940	4.15.1.2 ↗	beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112	0.62	51.0	5.18e-01	88.7%	94.3%
3586284	4.8.1.6 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot	0.61	42.0	4.69e-01	74.5%	92.5%
3441143	4.1.1.94 ↗	beta barrels › SH3 › SH3 › SH3 › SAWADEE	0.60	41.0	4.26e-01	76.4%	74.0%
3925069	4.1.1.319 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9	0.60	47.0	4.28e-01	83.0%	88.6%
3738161	4.18.1.1 ↗	beta barrels › SH3 › Plus3 › Plus3 › Plus-3	0.60	43.0	4.12e-01	75.5%	65.6%
3254941	4.18.1.1 ↗	beta barrels › SH3 › Plus3 › Plus3 › Plus-3	0.59	42.0	4.01e-01	74.5%	62.3%
3498558	4.18.1.1 ↗	beta barrels › SH3 › Plus3 › Plus3 › Plus-3	0.59	43.0	3.84e-01	75.5%	54.7%
3939175	4.18.1.1 ↗	beta barrels › SH3 › Plus3 › Plus3 › Plus-3	0.59	43.0	3.86e-01	76.4%	75.3%
3582834	4.1.1.319 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9	0.57	43.0	4.54e-01	79.2%	91.6%
4402697	1.1.5.25 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ	0.57	34.0	3.34e-01	100.0%	53.3%
3588755	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.54	34.0	3.96e-01	97.2%	90.5%
3627688	4.1.1.319 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9	0.54	48.0	4.31e-01	100.0%	88.0%
3273545	4004.1.1.1 ↗	beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › YegS_C	0.54	40.0	3.35e-01	78.3%	81.5%
5030993	3115.1.1.1 ↗	a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A	0.53	31.0	3.47e-01	94.3%	73.8%
3597134	1.1.17.0 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2	0.52	39.0	2.88e-01	80.2%	45.8%
3464137	4.1.1.152 ↗	beta barrels › SH3 › SH3 › SH3 › DUF1262	0.51	45.0	3.87e-01	97.2%	95.8%