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MN908688.1__QIG58382.1__SEA_CORNIE_4__00004
Bact-VirMN908688.1__QIG58382.1__SEA_CORNIE_4__00004
Identity
- Accession:
- MN908688 ↗
- Kingdom:
- phage
Quality
82.0
mean pLDDT
Taxonomy
TaxID: 2704043
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 54-121
Domain cluster:
representative
D2
medium
residues 122-183
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5wpjB03 | 1.10.8.660 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.76 | 59.0 | 6.31e-01 | 95.2% | 100.0% |
| 7uuim02 | 1.10.1580.10 | Mainly Alpha › Orthogonal Bundle › Conserved Hypothetical Protein Ylqf; Chain: A; domain 2 › | 0.66 | 45.0 | 4.14e-01 | 71.0% | 76.5% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.59 | 48.0 | 4.46e-01 | 96.8% | 72.2% |
| 1w36B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 40.0 | 2.69e-01 | 75.8% | 58.1% |
| 2pfdA03 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.53 | 41.0 | 2.92e-01 | 87.1% | 90.6% |
| 1uz3B00 | 1.10.1240.40 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › ENT domain | 0.52 | 47.0 | 4.03e-01 | 100.0% | 70.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3701812 | 2498.5.1.0 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like | 0.77 | 53.0 | 4.22e-01 | 71.0% | 99.1% |
| 5028897 | 2004.1.1.59 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CoaE | 0.69 | 58.0 | 4.03e-01 | 91.9% | 95.0% |
| 3786602 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.65 | 50.0 | 4.43e-01 | 85.5% | 71.6% |
| 3437969 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 53.0 | 4.85e-01 | 91.9% | 94.0% |
| 3657184 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.64 | 49.0 | 4.12e-01 | 85.5% | 61.8% |
| 4157292 | 3317.1.1.2 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB | 0.63 | 45.0 | 4.61e-01 | 88.7% | 80.0% |
| 4026520 | 4085.1.1.5 ↗ | alpha arrays › RbcX-like › RbcX-like › RbcX-like › Stevor | 0.63 | 45.0 | 4.23e-01 | 75.8% | 90.7% |
| 4533626 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.62 | 43.0 | 3.85e-01 | 74.2% | 48.4% |
| 2724036 | 3009.1.1.0 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like | 0.60 | 44.0 | 4.38e-01 | 79.0% | 85.9% |
| 5061261 | 4133.1.1.0 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like | 0.54 | 48.0 | 4.75e-01 | 96.8% | 98.4% |
| 3806415 | 4133.1.1.2 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Tic110 | 0.54 | 48.0 | 3.91e-01 | 100.0% | 56.5% |
| 3596791 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.54 | 41.0 | 2.91e-01 | 85.5% | 35.7% |
| 3362789 | 4133.1.1.2 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Tic110 | 0.53 | 46.0 | 3.95e-01 | 98.4% | 64.0% |
| 5045622 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.52 | 35.0 | 2.25e-01 | 74.2% | 13.7% |
| 3441767 | 4133.1.1.2 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Tic110 | 0.51 | 46.0 | 3.01e-01 | 100.0% | 24.7% |
| 3927989 | 4133.1.1.1 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › ENT | 0.51 | 45.0 | 3.99e-01 | 100.0% | 93.3% |