Back to structures

MN908693.1__QIG58980.1__SEA_ANCLAR_53__00053

Bact-Vir

MN908693.1__QIG58980.1__SEA_ANCLAR_53__00053

Identity

Accession:
MN908693 ↗
Kingdom:
phage

Quality

79.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-146
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3holA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.57 27.0 3.25e-01 76.9% 65.2%
4pn0C00 3.20.100.10 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like 0.55 40.0 3.17e-01 74.6% 62.9%
1atiB01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.52 37.0 2.90e-01 74.6% 71.8%
1lmiA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 36.0 3.61e-01 94.6% 71.8%
2pmeA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.51 35.0 2.73e-01 71.5% 67.9%
1yqzA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.50 36.0 3.91e-01 90.8% 88.9%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4002212 2007.2.3.24 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PF27561 0.57 48.0 3.33e-01 89.2% 78.3%
3937903 2007.2.4.4 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphoinositide phosphatase › PF27561 0.56 47.0 3.20e-01 89.2% 78.4%
3927960 11.1.1.1174 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Neur_chan_LBD 0.55 33.0 3.35e-01 100.0% 59.2%
3716842 243.1.1.86 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2_MEX67 0.53 36.0 3.28e-01 71.5% 52.9%
3974176 5084.8.1.0 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore 0.52 41.0 2.83e-01 83.8% 30.7%
3954794 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.52 35.0 3.30e-01 81.5% 57.4%
3190012 883.1.1.12 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › DUF5923 0.51 41.0 3.49e-01 88.5% 77.8%
3208374 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.50 43.0 4.20e-01 92.3% 88.6%