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MN940411.1__QIA28581.1__X__00078
Bact-VirMN940411.1__QIA28581.1__X__00078
Identity
- Accession:
- MN940411 ↗
- Kingdom:
- phage
Quality
95.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-60
Domain cluster:
rep: MK448710.1__QBX16110.1__Javan233_0030__00030__D34-99
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p84A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.86 | 76.0 | 6.92e-01 | 96.4% | 76.7% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 59.0 | 4.90e-01 | 85.7% | 61.5% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 57.0 | 5.28e-01 | 89.3% | 95.7% |
| 2im9A02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.67 | 56.0 | 4.14e-01 | 92.9% | 82.3% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 56.0 | 5.11e-01 | 91.1% | 95.8% |
| 3prbA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.66 | 44.0 | 4.86e-01 | 71.4% | 88.6% |
| 2ekhA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 46.0 | 4.10e-01 | 76.8% | 70.0% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 45.0 | 4.25e-01 | 75.0% | 80.9% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 48.0 | 4.99e-01 | 82.1% | 94.0% |
| 6o5cA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.63 | 49.0 | 4.51e-01 | 89.3% | 97.4% |
| 1ov3A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 43.0 | 4.41e-01 | 73.2% | 98.2% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 48.0 | 3.77e-01 | 85.7% | 73.4% |
| 4crsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 44.0 | 3.41e-01 | 76.8% | 74.6% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 44.0 | 4.37e-01 | 75.0% | 98.3% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 49.0 | 4.63e-01 | 89.3% | 91.3% |
| 2zo4A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.61 | 46.0 | 3.04e-01 | 82.1% | 36.1% |
| 4msxA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 48.0 | 3.13e-01 | 92.9% | 36.1% |
| 2gfoA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 47.0 | 2.96e-01 | 89.3% | 22.4% |
| 1xm8A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.61 | 46.0 | 3.05e-01 | 83.9% | 20.9% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 48.0 | 4.65e-01 | 89.3% | 90.8% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 47.0 | 4.93e-01 | 92.9% | 98.0% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 43.0 | 4.09e-01 | 75.0% | 84.6% |
| 2vhlA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 45.0 | 2.86e-01 | 82.1% | 84.4% |
| 5cvmA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 47.0 | 3.05e-01 | 92.9% | 47.4% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 42.0 | 4.51e-01 | 76.8% | 95.8% |
| 3agrA02 | 3.30.420.540 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.59 | 46.0 | 2.87e-01 | 89.3% | 62.9% |
| 2eayB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 43.0 | 4.53e-01 | 80.4% | 98.0% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 45.0 | 3.53e-01 | 89.3% | 38.0% |
| 2gcuA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.58 | 46.0 | 3.10e-01 | 87.5% | 40.9% |
| 4azpA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 44.0 | 3.51e-01 | 89.3% | 52.2% |
| 2w20A02 | 2.40.220.10 | Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 | 0.58 | 45.0 | 4.17e-01 | 92.9% | 83.7% |
| 3h6zA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 50.0 | 4.02e-01 | 100.0% | 57.1% |
| 3gceA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.57 | 44.0 | 3.67e-01 | 87.5% | 95.2% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 38.0 | 3.86e-01 | 73.2% | 86.2% |
| 3nmzD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 48.0 | 4.26e-01 | 98.2% | 81.0% |
| 5o99A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 39.0 | 3.90e-01 | 76.8% | 91.7% |
| 2f09A00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.55 | 42.0 | 3.81e-01 | 87.5% | 90.2% |
| 3bfmA02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 37.0 | 4.05e-01 | 71.4% | 93.0% |
| 1io1A02 | 2.170.280.10 | Mainly Beta › Beta Complex › f41 fragment of flagellin, middle domain › f41 fragment of flagellin, middle domain | 0.52 | 43.0 | 3.40e-01 | 96.4% | 51.1% |
| 6uzjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 46.0 | 4.44e-01 | 100.0% | 93.7% |
| 3n6rA03 | 3.30.700.30 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.51 | 41.0 | 3.31e-01 | 98.2% | 76.7% |
| 2cw5A02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.51 | 42.0 | 3.65e-01 | 94.6% | 94.4% |
| 1hxdA03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 35.0 | 3.76e-01 | 75.0% | 100.0% |
| 4g6iB01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.51 | 43.0 | 3.73e-01 | 96.4% | 64.0% |
| 3oymA01 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.50 | 42.0 | 3.58e-01 | 94.6% | 79.6% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3590122 | 4999.1.1.1 ↗ | beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX | 0.88 | 64.0 | 6.06e-01 | 76.8% | 80.0% |
| 4031064 | 4999.1.1.0 ↗ | beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like | 0.81 | 56.0 | 5.65e-01 | 71.4% | 72.7% |
| 5023740 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 55.0 | 5.84e-01 | 82.1% | 94.0% |
| 4945288 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 50.0 | 5.59e-01 | 73.2% | 97.7% |
| 4938404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 56.0 | 5.72e-01 | 96.4% | 85.5% |
| 4116754 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.71 | 54.0 | 5.90e-01 | 80.4% | 100.0% |
| 4982334 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 56.0 | 5.68e-01 | 96.4% | 89.1% |
| 5002449 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 55.0 | 5.61e-01 | 100.0% | 89.1% |
| 3504385 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.68 | 46.0 | 5.16e-01 | 73.2% | 97.5% |
| 4966534 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 53.0 | 5.54e-01 | 96.4% | 96.0% |
| 3515528 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.68 | 47.0 | 4.40e-01 | 73.2% | 94.3% |
| 4935681 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 56.0 | 5.64e-01 | 96.4% | 92.7% |
| 3518437 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.67 | 47.0 | 4.29e-01 | 73.2% | 70.7% |
| 4024411 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 47.0 | 4.83e-01 | 76.8% | 76.4% |
| 3519410 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.67 | 45.0 | 5.05e-01 | 73.2% | 100.0% |
| 4957409 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 50.0 | 5.28e-01 | 94.6% | 92.0% |
| 3507373 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.65 | 46.0 | 4.21e-01 | 75.0% | 89.3% |
| 165657 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.65 | 46.0 | 4.34e-01 | 75.0% | 82.1% |
| 4434185 | 3804.1.1.1 ↗ | alpha bundles › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain › CRISPR-Cas system RNase C2c2 N-terminal domain › Cas13a_endoribonuclease | 0.65 | 48.0 | 3.52e-01 | 82.1% | 30.3% |
| 4168653 | 4.1.1.111 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_RapA | 0.64 | 47.0 | 4.95e-01 | 78.6% | 100.0% |
| 3516364 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.64 | 43.0 | 4.71e-01 | 73.2% | 97.5% |
| 3207383 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.64 | 46.0 | 2.92e-01 | 78.6% | 24.3% |
| 3269758 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.64 | 45.0 | 4.01e-01 | 75.0% | 68.8% |
| 3507374 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.64 | 43.0 | 3.97e-01 | 73.2% | 91.3% |
| 3638043 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.64 | 46.0 | 2.93e-01 | 78.6% | 25.4% |
| 3519725 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.63 | 42.0 | 4.57e-01 | 73.2% | 97.5% |
| 3910605 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.63 | 44.0 | 3.93e-01 | 75.0% | 76.2% |
| 3706087 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 54.0 | 5.30e-01 | 94.6% | 90.0% |
| 4019925 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.62 | 45.0 | 4.20e-01 | 76.8% | 80.0% |
| 3970136 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.62 | 52.0 | 4.30e-01 | 96.4% | 81.9% |
| 4104114 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.62 | 44.0 | 4.20e-01 | 75.0% | 83.1% |
| 3924149 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 48.0 | 5.09e-01 | 98.2% | 96.0% |
| 3453664 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.62 | 47.0 | 3.52e-01 | 85.7% | 72.7% |
| 3809821 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.61 | 51.0 | 3.23e-01 | 100.0% | 39.4% |
| 3737825 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.61 | 43.0 | 4.39e-01 | 75.0% | 100.0% |
| 3832604 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 51.0 | 2.94e-01 | 100.0% | 21.3% |
| 3413140 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.61 | 46.0 | 3.29e-01 | 85.7% | 27.4% |
| 3964033 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.61 | 44.0 | 4.63e-01 | 78.6% | 98.0% |
| 4275625 | 375.1.1.47 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC | 0.61 | 43.0 | 4.29e-01 | 78.6% | 83.3% |
| 1405101 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.60 | 43.0 | 4.54e-01 | 78.6% | 92.0% |
| 5038405 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 43.0 | 4.57e-01 | 100.0% | 100.0% |
| 4481026 | 4.1.1.407 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29661 | 0.58 | 49.0 | 4.78e-01 | 96.4% | 85.0% |
| 4963111 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.58 | 42.0 | 4.53e-01 | 78.6% | 100.0% |
| 4139778 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.58 | 47.0 | 4.40e-01 | 92.9% | 87.7% |
| 3412178 | 4184.1.1.1 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 | 0.58 | 47.0 | 4.41e-01 | 91.1% | 92.8% |
| 3472428 | 4184.1.1.1 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 | 0.58 | 48.0 | 4.28e-01 | 92.9% | 81.2% |
| 3389451 | 4184.1.1.1 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 | 0.58 | 48.0 | 4.38e-01 | 92.9% | 86.7% |
| 3405941 | 4184.1.1.1 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 | 0.57 | 47.0 | 4.47e-01 | 92.9% | 97.1% |
| 4987649 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.57 | 42.0 | 2.91e-01 | 85.7% | 40.4% |
| 3282992 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.56 | 47.0 | 3.84e-01 | 94.6% | 60.2% |
| 5038074 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.56 | 47.0 | 3.24e-01 | 100.0% | 62.6% |
| 3520872 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.56 | 40.0 | 3.71e-01 | 78.6% | 89.3% |
| 4986214 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.56 | 45.0 | 3.88e-01 | 92.9% | 96.8% |
| 1625106 | 4.1.1.90 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4444 | 0.55 | 37.0 | 4.05e-01 | 71.4% | 93.0% |
| 3482663 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.55 | 45.0 | 4.20e-01 | 92.9% | 92.9% |
| 3496211 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.54 | 45.0 | 4.25e-01 | 98.2% | 77.1% |
| 3785687 | 220.1.1.58 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like | 0.54 | 38.0 | 3.14e-01 | 76.8% | 68.7% |
| 4027218 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 44.0 | 3.93e-01 | 92.9% | 88.7% |
| 3472295 | 4184.1.1.1 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 | 0.53 | 44.0 | 4.01e-01 | 98.2% | 72.5% |
| 3218678 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 35.0 | 3.42e-01 | 73.2% | 84.6% |
| 3218510 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.51 | 37.0 | 3.20e-01 | 80.4% | 51.0% |