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MN940411.1__QIA28635.1__X__00133
Bact-VirMN940411.1__QIA28635.1__X__00133
Identity
- Accession:
- MN940411 ↗
- Kingdom:
- phage
Quality
74.3
mean pLDDT
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-86
Domain cluster:
rep: JQ312117.1__AFH19780.1__7-7-1_00082__00082__D8-69
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c0kA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.64 | 53.0 | 3.93e-01 | 92.0% | 58.6% |
| 3g7pA00 | 1.10.3100.20 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Protein of unknown function DUF269 | 0.61 | 49.0 | 3.95e-01 | 86.7% | 86.2% |
| 3f2bA05 | 6.10.50.10 | Special › Helix non-globular › Insulin-like, subunit E › | 0.61 | 35.0 | 4.13e-01 | 73.3% | 87.5% |
| 4nleA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.57 | 43.0 | 4.36e-01 | 84.0% | 100.0% |
| 4r7eA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 32.0 | 3.31e-01 | 100.0% | 59.4% |
| 2fsjA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 46.0 | 3.85e-01 | 92.0% | 84.8% |
| 1nrfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 47.0 | 3.36e-01 | 97.3% | 87.8% |
| 2amxB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 47.0 | 3.10e-01 | 97.3% | 41.6% |
| 1qgiA01 | 3.30.386.10 | Alpha Beta › 2-Layer Sandwich › Chitosanase; Chain A, domain 2 › Chitosanase, subunit A, domain 2 | 0.55 | 42.0 | 3.53e-01 | 86.7% | 70.1% |
| 2jpiA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.55 | 47.0 | 4.38e-01 | 100.0% | 92.7% |
| 1vrmA02 | 1.10.3980.10 | Mainly Alpha › Orthogonal Bundle › T-fold › ApbE-like superfamily | 0.53 | 38.0 | 3.49e-01 | 77.3% | 86.1% |
| 2ypdB01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.52 | 46.0 | 3.05e-01 | 100.0% | 36.3% |
| 1fkwA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.52 | 44.0 | 2.92e-01 | 97.3% | 47.6% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.52 | 36.0 | 3.54e-01 | 85.3% | 68.4% |
| 1ctfA00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.52 | 40.0 | 4.18e-01 | 100.0% | 97.1% |
| 3b8pA00 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.51 | 44.0 | 3.30e-01 | 100.0% | 93.2% |
| 1gtxA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 40.0 | 2.85e-01 | 96.0% | 79.3% |
| 1v63A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.50 | 35.0 | 3.20e-01 | 78.7% | 54.5% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.63 | 52.0 | 4.28e-01 | 92.0% | 81.4% | |
| 3781276 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.60 | 42.0 | 4.43e-01 | 84.0% | 86.2% |
| 4964669 | 2484.1.1.341 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Salactin | 0.59 | 49.0 | 3.69e-01 | 93.3% | 75.8% |
| 3419895 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.56 | 43.0 | 3.12e-01 | 96.0% | 27.6% |
| 3793643 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 42.0 | 2.58e-01 | 80.0% | 43.0% |
| 5025634 | 2484.1.1.87 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MreB-like_C | 0.56 | 46.0 | 3.63e-01 | 93.3% | 78.2% |
| 3344263 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 48.0 | 3.50e-01 | 100.0% | 46.3% |
| 4996405 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.53 | 43.0 | 3.05e-01 | 90.7% | 90.8% |
| 3268570 | 178.1.1.1 ↗ | alpha arrays › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB | 0.52 | 45.0 | 4.09e-01 | 100.0% | 97.1% |
| 3607479 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.52 | 40.0 | 4.10e-01 | 88.0% | 96.0% |
| 3594075 | 308.1.1.0 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related | 0.52 | 40.0 | 3.96e-01 | 100.0% | 82.5% |
| 4992830 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.52 | 42.0 | 3.07e-01 | 92.0% | 81.3% |
| 5012698 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.51 | 44.0 | 4.27e-01 | 100.0% | 90.6% |
| 3578498 | 304.120.1.10 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › PF25904 | 0.51 | 42.0 | 4.34e-01 | 100.0% | 100.0% |
| 4027537 | 308.1.1.1 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related › Ribosomal_L12 | 0.51 | 39.0 | 4.02e-01 | 97.3% | 94.3% |
| 3762580 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.51 | 36.0 | 3.59e-01 | 76.0% | 71.2% |