←Back to structures
MN940411.1__QIA28646.1__X__00144
Bact-VirMN940411.1__QIA28646.1__X__00144
Identity
- Accession:
- MN940411 ↗
- Kingdom:
- phage
Quality
94.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-59
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rm6D04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.73 | 53.0 | 3.39e-01 | 75.9% | 95.8% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 59.0 | 5.23e-01 | 94.4% | 89.0% |
| 5hiwA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.70 | 61.0 | 3.66e-01 | 100.0% | 53.7% |
| 2gf2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.69 | 49.0 | 3.66e-01 | 74.1% | 84.3% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.69 | 48.0 | 4.28e-01 | 72.2% | 83.8% |
| 6fakA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.69 | 55.0 | 4.84e-01 | 88.9% | 67.9% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.67 | 45.0 | 3.90e-01 | 70.4% | 76.5% |
| 3ckyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.66 | 47.0 | 3.53e-01 | 74.1% | 79.9% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 46.0 | 3.73e-01 | 75.9% | 79.0% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.64 | 49.0 | 4.48e-01 | 100.0% | 61.3% |
| 1op1A00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.64 | 50.0 | 4.42e-01 | 87.0% | 80.5% |
| 1lujB01 | 1.10.10.490 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Beta-catenin-interacting ICAT | 0.64 | 50.0 | 5.04e-01 | 96.3% | 84.9% |
| 1sxjB03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.62 | 45.0 | 3.86e-01 | 79.6% | 47.8% |
| 2lf3A00 | 1.20.1280.220 | Mainly Alpha › Up-down Bundle › Monooxygenase › Effector protein HopAB, BAK1-interacting domain | 0.62 | 45.0 | 3.73e-01 | 90.7% | 41.9% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 54.0 | 4.70e-01 | 100.0% | 84.3% |
| 3m3mA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 43.0 | 3.37e-01 | 75.9% | 56.0% |
| 1v9vA01 | 1.20.1480.20 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › MAST3 pre-PK domain-like | 0.59 | 49.0 | 4.09e-01 | 94.4% | 84.2% |
| 5l3wA01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.59 | 46.0 | 4.03e-01 | 88.9% | 61.9% |
| 2l09A01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.58 | 45.0 | 4.63e-01 | 90.7% | 86.5% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.57 | 40.0 | 3.79e-01 | 72.2% | 64.1% |
| 3idwA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.56 | 50.0 | 4.66e-01 | 100.0% | 92.4% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.55 | 44.0 | 3.74e-01 | 100.0% | 68.2% |
| 3hl1A02 | 6.10.140.1530 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 43.0 | 4.06e-01 | 87.0% | 93.8% |
| 2f33A01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.53 | 41.0 | 3.80e-01 | 98.1% | 66.2% |
| 2eljA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 4.08e-01 | 98.1% | 77.3% |
| 2kruA01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.52 | 43.0 | 4.45e-01 | 94.4% | 96.2% |
| 3bosA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 44.0 | 4.17e-01 | 96.3% | 89.6% |
| 2ewfA02 | 1.20.1270.310 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.52 | 39.0 | 3.50e-01 | 83.3% | 63.0% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 41.0 | 3.79e-01 | 92.6% | 83.6% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3599924 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 54.0 | 5.32e-01 | 100.0% | 73.3% |
| 3718035 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 53.0 | 5.01e-01 | 98.1% | 69.2% |
| 3713235 | 138.1.1.2 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Rep_fac_C | 0.68 | 50.0 | 4.20e-01 | 77.8% | 50.0% |
| 2596506 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.66 | 47.0 | 3.47e-01 | 77.8% | 80.5% |
| 4927172 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.65 | 51.0 | 4.12e-01 | 83.3% | 54.0% |
| 3725560 | 150.1.2.19 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › COQ7 | 0.62 | 54.0 | 3.66e-01 | 100.0% | 68.8% |
| 3961544 | 109.4.1.3571 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28008 | 0.62 | 43.0 | 3.65e-01 | 75.9% | 72.4% |
| 3941718 | 185.1.2.0 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Protein HNS-dependent expression A HdeA | 0.60 | 47.0 | 4.42e-01 | 90.7% | 68.6% |
| 3603160 | 2006.1.2.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH | 0.60 | 52.0 | 3.53e-01 | 100.0% | 65.6% |
| 5042914 | 169.1.1.1 ↗ | alpha complex topology › Aldehyde ferredoxin oxidoreductase-C › Aldehyde ferredoxin oxidoreductase-C › Aldehyde ferredoxin oxidoreductase-C › AFOR_C | 0.60 | 51.0 | 3.13e-01 | 96.3% | 16.9% |
| 4363511 | 140.1.1.7 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 | 0.59 | 52.0 | 4.04e-01 | 100.0% | 92.5% |
| 3213894 | 616.1.1.21 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › DUF4473 | 0.59 | 48.0 | 4.45e-01 | 100.0% | 100.0% |
| 4935188 | 2006.1.2.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH | 0.59 | 51.0 | 3.55e-01 | 100.0% | 73.2% |
| 4393358 | 140.1.1.4 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e,DALR_2 | 0.59 | 52.0 | 3.81e-01 | 100.0% | 76.6% |
| 5042089 | 2006.1.2.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH | 0.58 | 50.0 | 3.41e-01 | 100.0% | 71.2% |
| 4400266 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.58 | 48.0 | 3.79e-01 | 90.7% | 64.5% |
| 3912246 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.58 | 41.0 | 3.26e-01 | 75.9% | 38.3% |
| 3961597 | 7579.1.1.62 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_8 | 0.58 | 47.0 | 2.89e-01 | 92.6% | 68.2% |
| 4974459 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.57 | 49.0 | 4.58e-01 | 100.0% | 84.3% |
| 3734641 | 3924.1.1.0 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 | 0.57 | 49.0 | 3.05e-01 | 100.0% | 37.9% |
| 4214986 | 148.1.1.13 ↗ | alpha arrays › Histone-like › Histone-related › Histone › PCP_red | 0.57 | 45.0 | 4.64e-01 | 85.2% | 88.7% |
| 4566276 | 7579.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 | 0.57 | 44.0 | 2.71e-01 | 94.4% | 45.6% |
| 4489833 | 6130.1.1.1 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Se-cys_synth_N | 0.57 | 47.0 | 4.37e-01 | 96.3% | 78.6% |
| 3163576 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.56 | 45.0 | 2.99e-01 | 88.9% | 80.4% |
| 3458880 | 611.7.1.16 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › PUB2_N | 0.56 | 47.0 | 3.23e-01 | 100.0% | 37.7% |
| 3600071 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.55 | 44.0 | 4.17e-01 | 100.0% | 73.8% |
| 5078120 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.55 | 46.0 | 4.31e-01 | 100.0% | 84.3% |
| 4646933 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.54 | 39.0 | 3.68e-01 | 83.3% | 62.7% |
| 5024540 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.53 | 43.0 | 3.24e-01 | 92.6% | 44.8% |
| 5039500 | 323.1.1.1 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › 2-oxoacid_dh | 0.51 | 45.0 | 2.79e-01 | 100.0% | 35.8% |
| 4990303 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.51 | 41.0 | 3.12e-01 | 94.4% | 49.0% |