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MN956515.1__QIQ61288.1__V039C_0010__00010

Bact-Vir

MN956515.1__QIQ61288.1__V039C_0010__00010

Identity

Accession:
MN956515 ↗
Kingdom:
phage

Quality

88.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_V039C

TaxID: 2696679

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-88
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wadA01 6.20.70.10 Special › Other non-globular › Ubiquitin Ligase Nedd4; Chain: W; › 0.59 25.0 3.37e-01 80.6% 80.0%
1rp5A01 2.20.70.70 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.52 25.0 3.13e-01 81.9% 77.8%
3njaA02 2.10.70.100 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.51 30.0 3.41e-01 81.9% 87.0%
3t69A01 3.30.420.300 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, substrate binding domain 0.51 33.0 3.26e-01 93.1% 62.7%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4413995 103.2.1.5 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_2_N 0.54 33.0 2.64e-01 88.9% 29.0%
4197307 71.1.1.3 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.53 43.0 3.41e-01 93.1% 93.3%
4807816 3324.1.1.1 ↗ extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › MTR4_beta-barrel 0.52 28.0 2.97e-01 80.6% 54.7%