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MN988465.1__QIG67115.1__EVB34_010__00010

Bact-Vir

MN988465.1__QIG67115.1__EVB34_010__00010

Identity

Accession:
MN988465 ↗
Kingdom:
phage

Quality

93.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-75
PDB
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.83 76.0 7.17e-01 100.0% 88.2%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.76 57.0 5.88e-01 93.8% 86.4%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.71 60.0 5.84e-01 100.0% 85.7%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 46.0 4.36e-01 82.8% 56.4%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 54.0 5.52e-01 96.9% 91.9%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 4.51e-01 100.0% 53.4%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.65 56.0 5.08e-01 100.0% 87.8%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 51.0 5.24e-01 98.4% 93.2%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 46.0 4.83e-01 85.9% 85.7%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.64 49.0 4.68e-01 100.0% 70.1%
1whjA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.64 53.0 4.59e-01 93.8% 79.4%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.64 56.0 5.36e-01 100.0% 95.9%
4wsfA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 52.0 4.45e-01 95.3% 71.2%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 4.71e-01 100.0% 69.9%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.62 54.0 5.10e-01 100.0% 91.1%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.62 44.0 3.85e-01 76.6% 49.5%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.62 53.0 4.58e-01 100.0% 71.2%
1o5yA00 3.10.690.10 Alpha Beta › Roll › Bifunctional nuclease domain › Bifunctional nuclease domain 0.61 46.0 3.61e-01 81.2% 83.9%
4ac9C04 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.61 42.0 3.96e-01 100.0% 57.5%
3bg3A01 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.61 44.0 3.83e-01 78.1% 81.2%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 50.0 3.83e-01 100.0% 66.3%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.60 51.0 3.92e-01 96.9% 55.6%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 52.0 5.01e-01 100.0% 89.0%
4wyqB00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 39.0 3.80e-01 70.3% 74.7%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 45.0 4.51e-01 100.0% 86.2%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 50.0 4.78e-01 100.0% 84.0%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.58 51.0 4.04e-01 100.0% 65.4%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 41.0 3.45e-01 79.7% 72.4%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 37.0 3.77e-01 79.7% 67.7%
3fssA01 2.30.29.120 Mainly Beta › Roll › PH-domain like › 0.56 47.0 3.82e-01 100.0% 63.2%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 41.0 3.42e-01 82.8% 91.5%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.56 44.0 3.82e-01 100.0% 54.1%
4b63A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 42.0 2.57e-01 84.4% 93.8%
3wewA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 38.0 2.61e-01 71.9% 46.4%
1x49A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 37.0 3.66e-01 71.9% 80.0%
3u2gA02 2.60.98.40 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain 0.55 46.0 3.71e-01 95.3% 71.3%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 46.0 4.62e-01 95.3% 95.3%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.54 44.0 3.51e-01 96.9% 78.4%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 37.0 3.66e-01 71.9% 85.3%
3lhoA01 3.10.180.50 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 0.54 42.0 2.90e-01 87.5% 28.9%
2kx2A00 3.30.780.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › 0.53 39.0 3.47e-01 79.7% 91.7%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 35.0 3.22e-01 70.3% 58.5%
3p26B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 45.0 3.85e-01 100.0% 59.4%
2bm0A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 42.0 3.61e-01 90.6% 67.0%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 41.0 3.46e-01 100.0% 84.7%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 41.0 2.84e-01 100.0% 70.4%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.50 40.0 3.51e-01 95.3% 88.9%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
331968 4.1.1.55 beta barrels › SH3 › SH3 › SH3 › DUF1653 0.82 75.0 6.96e-01 100.0% 87.2%
3987601 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 60.0 6.67e-01 92.2% 100.0%
4547406 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.77 62.0 5.79e-01 100.0% 70.0%
3388362 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 61.0 3.43e-01 98.4% 8.0%
4423306 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.77 61.0 5.77e-01 100.0% 73.3%
3839369 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.77 61.0 5.64e-01 98.4% 68.8%
4549410 506.2.1.0 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain 0.76 60.0 3.32e-01 98.4% 6.2%
4077893 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 60.0 3.49e-01 98.4% 10.4%
4339993 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.76 60.0 5.40e-01 100.0% 62.2%
3600338 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 55.0 5.07e-01 79.7% 78.8%
4519674 4.1.1.186 beta barrels › SH3 › SH3 › SH3 › DUF5397 0.73 58.0 6.03e-01 100.0% 96.6%
3932586 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.72 60.0 4.43e-01 92.2% 65.0%
3391894 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.71 49.0 4.78e-01 82.8% 65.7%
3214131 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 53.0 4.99e-01 100.0% 66.3%
4123449 4.8.1.35 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 0.70 51.0 4.65e-01 78.1% 72.9%
3448975 4.1.1.66 beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.69 58.0 5.86e-01 100.0% 92.3%
3174977 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 51.0 4.55e-01 100.0% 53.7%
3301015 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 58.0 5.81e-01 100.0% 92.3%
3768116 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.68 60.0 4.16e-01 100.0% 29.3%
4945344 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 59.0 3.72e-01 95.3% 44.0%
3484700 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.68 57.0 4.95e-01 93.8% 99.0%
3553413 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.68 60.0 5.46e-01 100.0% 74.1%
3511007 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.68 60.0 4.90e-01 100.0% 53.3%
4615629 4.1.1.449 beta barrels › SH3 › SH3 › SH3 › DUF1292 0.67 52.0 4.79e-01 84.4% 76.5%
3214889 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 47.0 4.59e-01 81.2% 67.1%
2527304 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.67 53.0 5.48e-01 98.4% 93.4%
3742938 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.67 53.0 5.32e-01 96.9% 84.6%
4013406 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 57.0 5.42e-01 96.9% 97.3%
647 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.65 56.0 4.51e-01 100.0% 53.4%
4629735 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 49.0 4.94e-01 95.3% 81.5%
5029255 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.64 55.0 4.68e-01 95.3% 93.3%
3219441 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.64 56.0 5.25e-01 100.0% 96.2%
4505258 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 50.0 4.03e-01 82.8% 57.4%
4452123 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 55.0 4.78e-01 98.4% 92.0%
4422553 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.63 56.0 3.22e-01 100.0% 21.7%
4644007 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.63 48.0 4.99e-01 96.9% 89.8%
4641867 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.63 52.0 3.95e-01 93.8% 63.7%
4012945 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 55.0 5.27e-01 100.0% 94.7%
3470175 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.62 55.0 5.13e-01 100.0% 88.7%
3009336 3794.1.2.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase 0.62 44.0 4.29e-01 76.6% 68.5%
4029263 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.61 53.0 4.39e-01 100.0% 62.5%
3737837 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 53.0 5.30e-01 98.4% 96.9%
1175108 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.61 52.0 4.41e-01 100.0% 63.4%
3616769 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.60 49.0 4.38e-01 100.0% 62.1%
3344303 4.1.1.85 beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel 0.60 51.0 4.48e-01 98.4% 79.0%
3583879 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.60 42.0 2.78e-01 78.1% 16.0%
4937122 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.60 46.0 4.42e-01 84.4% 98.7%
4931657 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.60 46.0 4.30e-01 82.8% 67.5%
591 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.58 50.0 4.76e-01 100.0% 82.9%
3738244 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.58 46.0 2.96e-01 85.9% 29.5%
3507010 3794.1.2.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase 0.58 42.0 3.59e-01 76.6% 47.6%
1883336 1104.1.1.1 a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › DUF927 0.58 48.0 3.72e-01 93.8% 60.0%
3636503 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.57 49.0 4.82e-01 100.0% 91.4%
3460634 4.1.1.25 beta barrels › SH3 › SH3 › SH3 › PAZ 0.57 50.0 3.92e-01 100.0% 63.6%
3699350 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.57 49.0 3.17e-01 98.4% 25.7%
4931113 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.56 46.0 3.98e-01 100.0% 55.5%
5050497 2003.1.3.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 0.56 42.0 2.36e-01 82.8% 18.0%
3469353 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.56 47.0 2.99e-01 93.8% 42.9%
3726361 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 43.0 3.87e-01 82.8% 72.2%
3411042 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.56 41.0 4.25e-01 81.2% 95.0%
3720660 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 47.0 4.55e-01 100.0% 84.0%
4023011 2003.1.3.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8 0.56 40.0 2.89e-01 79.7% 45.3%
3636717 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.56 43.0 2.80e-01 87.5% 32.7%
3926869 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.56 43.0 2.77e-01 85.9% 25.5%
3937102 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.55 43.0 3.19e-01 87.5% 47.2%
3975926 2.4.1.17 beta barrels › OB-fold › MOP-like › MOP-like › DUF7765 0.55 40.0 3.71e-01 79.7% 77.6%
5081683 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.55 45.0 2.83e-01 98.4% 39.8%
None 0.55 43.0 2.83e-01 87.5% 29.7%
None 0.55 43.0 2.81e-01 87.5% 28.2%
4969515 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.55 40.0 2.54e-01 82.8% 35.8%
3687138 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.55 49.0 3.62e-01 100.0% 95.8%
3935939 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.55 43.0 2.79e-01 87.5% 27.2%
3709493 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 44.0 3.50e-01 92.2% 91.5%
3764041 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.53 35.0 3.35e-01 70.3% 68.8%
3940554 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.52 42.0 2.75e-01 89.1% 34.8%
3437840 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.52 43.0 2.88e-01 100.0% 36.5%
3940062 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.52 41.0 2.63e-01 85.9% 26.7%
3492822 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.52 42.0 2.71e-01 92.2% 29.9%
4961179 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.51 34.0 3.67e-01 78.1% 86.0%
3927077 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.51 39.0 2.59e-01 84.4% 29.5%
4640695 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.50 38.0 3.35e-01 84.4% 69.5%