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MN988468.1__QIG67294.1__EVB37_058__00057
Bact-VirMN988468.1__QIG67294.1__EVB37_058__00057
Identity
- Accession:
- MN988468 ↗
- Kingdom:
- phage
Quality
89.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-53
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4l7mA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.66 | 46.0 | 2.93e-01 | 73.6% | 28.0% |
| 3tw8A03 | 6.10.140.1000 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 47.0 | 5.05e-01 | 92.5% | 100.0% |
| 4y5jA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 49.0 | 3.16e-01 | 88.7% | 49.8% |
| 4u2xF00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 43.0 | 3.01e-01 | 79.2% | 24.6% |
| 3rylA02 | 1.10.720.170 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.59 | 42.0 | 3.68e-01 | 77.4% | 57.8% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 45.0 | 3.37e-01 | 100.0% | 34.7% |
| 5h66A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 37.0 | 2.66e-01 | 81.1% | 55.1% |
| 1br2A04 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 38.0 | 2.79e-01 | 88.7% | 88.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3805266 | 109.4.1.1255 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 | 0.67 | 47.0 | 2.57e-01 | 71.7% | 8.8% |
| 5058733 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.64 | 42.0 | 2.89e-01 | 73.6% | 19.5% |
| 3683429 | 109.4.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N | 0.64 | 45.0 | 2.67e-01 | 73.6% | 19.0% |
| 3406372 | 109.4.1.1255 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 | 0.63 | 44.0 | 2.94e-01 | 73.6% | 36.1% |
| 3866327 | 5050.1.1.40 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PGAP2IP_TM_1nd | 0.62 | 49.0 | 3.51e-01 | 92.5% | 92.0% |
| 4202212 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.60 | 45.0 | 3.35e-01 | 79.2% | 48.9% |
| 3577291 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 46.0 | 3.52e-01 | 94.3% | 34.6% |
| None | — | 0.60 | 44.0 | 2.72e-01 | 79.2% | 23.2% | |
| 3597322 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 44.0 | 2.50e-01 | 79.2% | 15.5% |
| 3793852 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 45.0 | 3.09e-01 | 94.3% | 22.0% |
| 3622496 | 109.4.1.326 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RICTOR_M | 0.54 | 39.0 | 2.75e-01 | 77.4% | 44.8% |
| 3575335 | 109.4.1.415 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RICTOR_V | 0.52 | 41.0 | 2.60e-01 | 88.7% | 22.8% |
| 2060362 | 2004.1.1.481 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_29 | 0.51 | 37.0 | 2.66e-01 | 81.1% | 55.1% |
D2
medium
residues 54-111
Domain cluster:
representative