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MN988468.1__QIG67309.1__EVB37_073__00072
Bact-VirMN988468.1__QIG67309.1__EVB37_073__00072
Identity
- Accession:
- MN988468 ↗
- Kingdom:
- phage
Quality
85.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-54
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gnrA01 | 6.10.30.10 | Special › Helix non-globular › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › | 0.65 | 42.0 | 3.84e-01 | 75.0% | 49.3% |
| 2l1aA00 | 3.10.20.530 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.64 | 45.0 | 3.50e-01 | 75.0% | 35.5% |
| 2ntxA01 | 1.20.58.2010 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 1 | 0.62 | 42.0 | 2.82e-01 | 71.2% | 89.0% |
| 2kdxA00 | 3.30.2320.80 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › | 0.61 | 42.0 | 3.36e-01 | 78.8% | 32.8% |
| 3dadA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.60 | 41.0 | 2.53e-01 | 71.2% | 13.6% |
| 4hpmD00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 41.0 | 3.59e-01 | 75.0% | 50.0% |
| 2vl6A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.59 | 39.0 | 4.07e-01 | 71.2% | 95.8% |
| 2d54A02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.59 | 41.0 | 3.32e-01 | 78.8% | 36.0% |
| 4y97D00 | 1.10.3200.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger | 0.58 | 41.0 | 2.94e-01 | 78.8% | 27.5% |
| 3floB00 | 1.10.3200.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger | 0.57 | 40.0 | 2.90e-01 | 76.9% | 25.0% |
| 1wx9A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 37.0 | 3.16e-01 | 75.0% | 39.5% |
| 2al3A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 36.0 | 3.18e-01 | 75.0% | 46.1% |
| 3axsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 42.0 | 2.67e-01 | 92.3% | 14.6% |
| 3l2pA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.54 | 39.0 | 3.00e-01 | 76.9% | 55.0% |
| 2dziA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 36.0 | 3.18e-01 | 75.0% | 43.2% |
| 3rt3B01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 36.0 | 3.24e-01 | 71.2% | 46.7% |
| 2dzkA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 36.0 | 3.26e-01 | 71.2% | 49.4% |
| 2kmcA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 36.0 | 2.99e-01 | 73.1% | 36.3% |
| 4a55A01 | 3.10.20.770 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 37.0 | 2.34e-01 | 75.0% | 14.2% |
| 3tiiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.53 | 36.0 | 3.47e-01 | 75.0% | 61.5% |
| 2dk6A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.52 | 36.0 | 3.14e-01 | 76.9% | 85.1% |
| 3qa8G02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 35.0 | 3.11e-01 | 75.0% | 46.8% |
| 3ungC01 | 3.30.70.2220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-Cas system, Cmr2 subunit, D1 domain, cysteine cluster | 0.52 | 38.0 | 2.52e-01 | 82.7% | 60.8% |
ECOD (76)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4986718 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.80 | 54.0 | 5.83e-01 | 71.2% | 82.2% |
| 4954096 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.76 | 57.0 | 4.07e-01 | 80.8% | 28.4% |
| 4618381 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 50.0 | 5.47e-01 | 80.8% | 97.5% |
| 4995608 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 47.0 | 3.46e-01 | 80.8% | 26.4% |
| 3414328 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.69 | 43.0 | 3.85e-01 | 73.1% | 44.0% |
| 3356255 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 48.0 | 4.41e-01 | 76.9% | 57.1% |
| 4945686 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 50.0 | 3.58e-01 | 84.6% | 25.6% |
| 4338085 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 47.0 | 4.97e-01 | 75.0% | 93.3% |
| 4571011 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 46.0 | 4.92e-01 | 73.1% | 95.0% |
| 4246886 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 47.0 | 4.66e-01 | 76.9% | 78.2% |
| 2487011 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 47.0 | 4.22e-01 | 84.6% | 52.6% |
| 2722671 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.66 | 47.0 | 3.90e-01 | 78.8% | 52.0% |
| 3518157 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 47.0 | 4.80e-01 | 78.8% | 94.0% |
| 4546356 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 47.0 | 4.07e-01 | 78.8% | 52.9% |
| 4279476 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 44.0 | 4.82e-01 | 73.1% | 92.5% |
| 4522265 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 44.0 | 4.82e-01 | 75.0% | 95.0% |
| 5000735 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 47.0 | 3.25e-01 | 78.8% | 24.0% |
| 3882461 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 41.0 | 3.68e-01 | 75.0% | 45.3% |
| 4241167 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.64 | 47.0 | 3.38e-01 | 80.8% | 27.1% |
| 4329890 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.64 | 49.0 | 3.60e-01 | 86.5% | 32.7% |
| 5080684 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.64 | 47.0 | 3.39e-01 | 80.8% | 28.4% |
| 4507638 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.63 | 49.0 | 3.50e-01 | 86.5% | 29.7% |
| 4480958 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 46.0 | 4.83e-01 | 80.8% | 100.0% |
| 5042462 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.63 | 48.0 | 3.47e-01 | 86.5% | 29.7% |
| 4317372 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.63 | 46.0 | 2.87e-01 | 88.5% | 12.4% |
| 4344487 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.63 | 48.0 | 3.45e-01 | 86.5% | 29.7% |
| 3627228 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 44.0 | 4.54e-01 | 76.9% | 100.0% |
| 4467359 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.62 | 43.0 | 3.10e-01 | 75.0% | 25.9% |
| 3999090 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.62 | 46.0 | 2.87e-01 | 88.5% | 12.5% |
| 4524152 | 375.1.1.203 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1, tRNA-synt_1g | 0.62 | 47.0 | 2.90e-01 | 92.3% | 12.1% |
| 5046339 | 304.17.1.2 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › Spt5-NGN | 0.62 | 52.0 | 4.00e-01 | 100.0% | 41.5% |
| 4221024 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 44.0 | 3.05e-01 | 78.8% | 25.4% |
| 3488429 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.62 | 47.0 | 3.30e-01 | 84.6% | 30.3% |
| 4025154 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.62 | 45.0 | 2.85e-01 | 80.8% | 14.0% |
| 4953034 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 42.0 | 4.38e-01 | 73.1% | 91.1% |
| 4456198 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 49.0 | 3.42e-01 | 92.3% | 28.1% |
| 4466102 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.61 | 44.0 | 3.17e-01 | 78.8% | 30.6% |
| None | — | 0.61 | 47.0 | 2.74e-01 | 92.3% | 8.7% | |
| 4292319 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.61 | 47.0 | 2.72e-01 | 92.3% | 8.4% |
| 4527101 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.61 | 44.0 | 3.17e-01 | 78.8% | 26.9% |
| 3605282 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 41.0 | 2.83e-01 | 73.1% | 20.6% |
| 4666101 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 40.0 | 4.26e-01 | 71.2% | 86.7% |
| 4403519 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 45.0 | 3.29e-01 | 86.5% | 32.4% |
| 4478999 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.60 | 45.0 | 3.27e-01 | 86.5% | 31.8% |
| 4541761 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.60 | 48.0 | 3.04e-01 | 94.2% | 16.4% |
| 5028348 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.60 | 45.0 | 3.15e-01 | 86.5% | 24.1% |
| 3670750 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 47.0 | 3.86e-01 | 100.0% | 50.8% |
| 5082704 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.59 | 47.0 | 3.26e-01 | 92.3% | 27.2% |
| 4645846 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.59 | 44.0 | 3.24e-01 | 86.5% | 32.4% |
| 3485716 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.59 | 44.0 | 3.14e-01 | 86.5% | 29.5% |
| 3394822 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.59 | 45.0 | 3.12e-01 | 86.5% | 27.7% |
| 4646072 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.59 | 42.0 | 3.06e-01 | 78.8% | 30.6% |
| None | — | 0.59 | 44.0 | 3.13e-01 | 86.5% | 29.2% | |
| 3940858 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 41.0 | 3.76e-01 | 75.0% | 55.7% |
| 4795496 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.59 | 44.0 | 4.10e-01 | 86.5% | 77.1% |
| 3332798 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.58 | 40.0 | 2.73e-01 | 71.2% | 21.7% |
| 3938245 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.58 | 45.0 | 3.10e-01 | 92.3% | 27.1% |
| 3550392 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 45.0 | 3.19e-01 | 92.3% | 31.9% |
| 3782920 | 376.1.1.43 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PRT6_C | 0.57 | 40.0 | 3.06e-01 | 75.0% | 28.9% |
| 3465479 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.57 | 45.0 | 3.05e-01 | 100.0% | 24.6% |
| 3223233 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.57 | 44.0 | 3.02e-01 | 92.3% | 24.8% |
| 4930596 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.57 | 43.0 | 3.10e-01 | 86.5% | 32.4% |
| 3255511 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.57 | 44.0 | 3.12e-01 | 92.3% | 30.0% |
| 3406249 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 38.0 | 3.29e-01 | 71.2% | 44.7% |
| 3640260 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.56 | 43.0 | 3.00e-01 | 90.4% | 28.8% |
| 4004118 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.56 | 45.0 | 3.25e-01 | 100.0% | 33.0% |
| 4029392 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.55 | 43.0 | 3.05e-01 | 92.3% | 30.3% |
| 3760118 | 386.1.1.24 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 | 0.54 | 39.0 | 3.39e-01 | 84.6% | 46.3% |
| 4865190 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.54 | 43.0 | 2.85e-01 | 100.0% | 25.4% |
| 5054122 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.53 | 40.0 | 3.09e-01 | 92.3% | 36.9% |
| 3797415 | 375.10.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha | 0.53 | 36.0 | 2.85e-01 | 71.2% | 39.2% |
| 3187460 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.53 | 39.0 | 2.82e-01 | 84.6% | 29.2% |
| 1879339 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 39.0 | 3.99e-01 | 88.5% | 90.4% |
| 5025395 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.52 | 42.0 | 2.60e-01 | 94.2% | 12.6% |
| 3693687 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.51 | 37.0 | 3.51e-01 | 80.8% | 72.3% |
| 5039984 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.51 | 41.0 | 3.07e-01 | 100.0% | 33.3% |