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MN988472.1__QIG67508.1__EVB41_043__00043
Bact-VirMN988472.1__QIG67508.1__EVB41_043__00043
Identity
- Accession:
- MN988472 ↗
- Kingdom:
- phage
Quality
66.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-82
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mqdA00 | 3.30.1460.60 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.66 | 56.0 | 4.80e-01 | 98.6% | 95.8% |
| 2z0fA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.59 | 50.0 | 4.26e-01 | 98.6% | 96.7% |
| 7x36A01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.57 | 48.0 | 3.23e-01 | 100.0% | 96.6% |
| 4ifaA01 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.57 | 40.0 | 2.74e-01 | 74.6% | 24.0% |
| 2ehbD00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.55 | 40.0 | 3.37e-01 | 77.5% | 60.3% |
| 2joiA00 | 3.30.310.190 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.55 | 38.0 | 3.47e-01 | 71.8% | 74.0% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 39.0 | 2.60e-01 | 76.1% | 62.4% |
| 4qxaB00 | 2.30.29.230 | Mainly Beta › Roll › PH-domain like › | 0.55 | 41.0 | 3.33e-01 | 83.1% | 68.7% |
| 2b1xA02 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.55 | 37.0 | 3.12e-01 | 70.4% | 82.5% |
| 3a58A01 | 2.30.29.90 | Mainly Beta › Roll › PH-domain like › | 0.55 | 43.0 | 3.35e-01 | 90.1% | 55.7% |
| 2w18A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 46.0 | 3.12e-01 | 100.0% | 94.8% |
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 41.0 | 3.74e-01 | 85.9% | 78.6% |
| 7c5wA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 40.0 | 3.20e-01 | 80.3% | 94.6% |
| 2y1sA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.53 | 36.0 | 3.22e-01 | 71.8% | 88.9% |
| 2dtcA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 41.0 | 3.58e-01 | 88.7% | 81.9% |
| 1iruI00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.52 | 43.0 | 3.18e-01 | 100.0% | 86.8% |
| 3qokA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.50 | 32.0 | 2.95e-01 | 74.6% | 47.4% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3241885 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 47.0 | 3.98e-01 | 88.7% | 63.2% |
| 3917937 | 220.1.1.173 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CERK | 0.57 | 46.0 | 3.95e-01 | 88.7% | 81.7% |
| 3958336 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 41.0 | 2.76e-01 | 77.5% | 44.7% |
| 3194113 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 46.0 | 2.89e-01 | 94.4% | 85.7% |
| 4031135 | 6043.1.1.3 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N | 0.56 | 38.0 | 3.68e-01 | 71.8% | 67.1% |
| 3476001 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.56 | 39.0 | 3.66e-01 | 74.6% | 83.9% |
| 3509038 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.56 | 39.0 | 3.57e-01 | 74.6% | 75.0% |
| 3206453 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.56 | 46.0 | 2.93e-01 | 100.0% | 85.8% |
| 3506427 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.56 | 46.0 | 3.97e-01 | 97.2% | 84.0% |
| 3885751 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.55 | 38.0 | 3.50e-01 | 71.8% | 77.9% |
| 3475361 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 46.0 | 3.78e-01 | 93.0% | 67.7% |
| 4465073 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.55 | 39.0 | 3.48e-01 | 76.1% | 72.1% |
| 3218150 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.54 | 45.0 | 3.39e-01 | 95.8% | 89.7% |
| 5053320 | 2003.1.2.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox | 0.54 | 46.0 | 3.73e-01 | 93.0% | 88.1% |
| 3995113 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.54 | 37.0 | 3.47e-01 | 73.2% | 81.1% |
| 4169299 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.54 | 36.0 | 3.23e-01 | 70.4% | 71.6% |
| 3252404 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.54 | 36.0 | 3.36e-01 | 70.4% | 80.0% |
| 4941120 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 38.0 | 2.95e-01 | 76.1% | 62.9% |
| 3996624 | 5.1.5.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_IFT140_1st, Beta-prop_IFT140_2nd | 0.53 | 41.0 | 2.62e-01 | 84.5% | 42.4% |
| 3612952 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 41.0 | 3.17e-01 | 87.3% | 47.1% |
| 3487488 | 220.1.1.37 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_13 | 0.52 | 43.0 | 3.43e-01 | 93.0% | 73.3% |
| 3325899 | 375.3.1.2 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger › zf-CSL | 0.52 | 37.0 | 3.47e-01 | 76.1% | 84.4% |
| 4008916 | 223.1.1.103 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE7, PF30448 | 0.52 | 40.0 | 2.59e-01 | 85.9% | 76.7% |
| 4584262 | 3222.1.1.1 ↗ | a+b complex topology › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › AceK_regulatory | 0.52 | 35.0 | 2.34e-01 | 91.5% | 16.1% |
| 3692299 | 5.1.3.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase | 0.51 | 43.0 | 2.77e-01 | 100.0% | 78.0% |
| 4971601 | 241.14.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › SARS-unique domain-C › SARS-unique domain-C | 0.51 | 35.0 | 3.55e-01 | 70.4% | 84.3% |
| 3408641 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 41.0 | 3.48e-01 | 93.0% | 76.9% |
| 4312097 | 295.1.1.15 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0128 | 0.51 | 38.0 | 3.00e-01 | 85.9% | 88.0% |
| 3482713 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 39.0 | 3.25e-01 | 85.9% | 73.3% |