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MN988472.1__QIG67535.1__EVB41_070__00070
Bact-VirMN988472.1__QIG67535.1__EVB41_070__00070
Identity
- Accession:
- MN988472 ↗
- Kingdom:
- phage
Quality
77.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-59
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bcqA04 | 3.30.210.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain | 0.63 | 46.0 | 4.42e-01 | 78.9% | 76.1% |
| 3hjhA02 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.59 | 44.0 | 3.99e-01 | 86.0% | 65.1% |
| 2kgtA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 42.0 | 3.88e-01 | 75.4% | 81.9% |
| 3tlqA00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.59 | 42.0 | 2.75e-01 | 75.4% | 20.8% |
| 2hjjA00 | 3.30.160.130 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains | 0.59 | 42.0 | 4.12e-01 | 80.7% | 74.2% |
| 2kjzA01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.56 | 35.0 | 3.59e-01 | 73.7% | 66.7% |
| 4a8jB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 41.0 | 2.80e-01 | 82.5% | 85.5% |
| 1f89A00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.55 | 39.0 | 2.58e-01 | 78.9% | 60.1% |
| 3kreA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 45.0 | 3.39e-01 | 94.7% | 44.3% |
| 2ej9A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 39.0 | 2.85e-01 | 89.5% | 35.6% |
| 3hdoA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 36.0 | 2.93e-01 | 78.9% | 56.2% |
| 2igsA00 | 1.10.3690.10 | Mainly Alpha › Orthogonal Bundle › PA2222-like fold › PA2222-like domain | 0.51 | 40.0 | 2.87e-01 | 96.5% | 72.0% |
| 2lttA00 | 2.30.31.70 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.50 | 34.0 | 3.21e-01 | 71.9% | 77.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4217957 | 219.1.1.79 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core2 | 0.69 | 59.0 | 4.31e-01 | 100.0% | 87.3% |
| 3163931 | 219.1.1.79 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core2 | 0.68 | 59.0 | 4.35e-01 | 100.0% | 37.4% |
| 3659765 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.61 | 43.0 | 4.37e-01 | 75.4% | 94.5% |
| 3291720 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.60 | 46.0 | 4.30e-01 | 86.0% | 86.7% |
| 3286426 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 45.0 | 4.16e-01 | 84.2% | 81.3% |
| 4031480 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 45.0 | 4.01e-01 | 87.7% | 78.9% |
| 3831068 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.59 | 41.0 | 4.23e-01 | 73.7% | 94.3% |
| 5830 | 330.7.1.1 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › DUF905 | 0.59 | 42.0 | 4.12e-01 | 80.7% | 74.2% |
| 4966333 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 42.0 | 4.03e-01 | 77.2% | 98.5% |
| 3718984 | 375.10.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha | 0.56 | 39.0 | 3.74e-01 | 73.7% | 75.4% |
| 3253183 | 328.8.1.1 ↗ | a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 › SLFN_AlbA_2 | 0.55 | 40.0 | 2.64e-01 | 80.7% | 26.0% |
| 3982925 | 2004.1.1.262 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF2813 | 0.54 | 39.0 | 2.48e-01 | 80.7% | 39.7% |
| 3438028 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.54 | 38.0 | 3.65e-01 | 91.2% | 64.3% |
| 3442564 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.53 | 37.0 | 3.81e-01 | 75.4% | 92.7% |
| 3306475 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.53 | 40.0 | 3.87e-01 | 96.5% | 72.5% |
| 3295810 | 386.1.1.249 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF25908 | 0.53 | 37.0 | 3.27e-01 | 73.7% | 64.7% |
| 3803137 | 376.1.1.63 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › C1_2 | 0.53 | 36.0 | 3.63e-01 | 73.7% | 100.0% |
| 4270773 | 2484.1.1.11 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p | 0.52 | 40.0 | 3.23e-01 | 87.7% | 83.3% |
| 3255441 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.50 | 37.0 | 2.88e-01 | 80.7% | 51.2% |
| 4507130 | 4099.1.1.1 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › MAD | 0.50 | 37.0 | 3.04e-01 | 82.5% | 72.2% |