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MN988485.1__QIG67933.1__EVB54_004__00004

Bact-Vir

MN988485.1__QIG67933.1__EVB54_004__00004

Identity

Accession:
MN988485 ↗
Kingdom:
phage

Quality

93.9 mean pLDDT

Taxonomy

Sangervirae› Phixviricota› Malgrandaviricetes› Petitvirales› Microviridae› Rhizobium_phage_RHph_Y67

TaxID: 2509786

Cluster

View cluster (10 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 38-131
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vo9A01 3.30.1380.10 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › 0.70 64.0 5.67e-01 100.0% 70.7%
5hnmC00 3.30.1380.10 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › 0.64 59.0 4.68e-01 100.0% 58.4%
5pabH01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 34.0 3.09e-01 73.4% 42.5%
1autC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 34.0 3.07e-01 75.5% 45.5%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4861717 307.1.1.11 ↗ a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › PF31190 0.70 58.0 5.25e-01 100.0% 66.4%
4552979 304.20.1.4 ↗ a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.60 34.0 2.88e-01 77.7% 32.5%