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MN988486.1__QIG68103.1__EVB55_168__00168

Bact-Vir

MN988486.1__QIG68103.1__EVB55_168__00168

Identity

Accession:
MN988486 ↗
Kingdom:
phage

Quality

85.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-51
PDB
Domain cluster: representative
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 64.0 5.92e-01 100.0% 85.5%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 59.0 5.49e-01 100.0% 77.4%
1w94A00 3.40.50.10480 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain 0.69 48.0 3.38e-01 73.5% 94.8%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 5.27e-01 100.0% 76.7%
2mamA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 58.0 4.44e-01 98.0% 83.1%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 58.0 5.19e-01 100.0% 84.7%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 58.0 5.47e-01 98.0% 100.0%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 4.97e-01 100.0% 68.8%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 60.0 5.47e-01 100.0% 92.2%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 58.0 5.04e-01 100.0% 70.1%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 5.08e-01 100.0% 74.6%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 57.0 4.89e-01 98.0% 75.3%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 56.0 5.64e-01 95.9% 94.0%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.66 56.0 5.38e-01 100.0% 84.2%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 57.0 5.32e-01 98.0% 95.2%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 57.0 5.41e-01 100.0% 98.3%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 5.13e-01 100.0% 75.8%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 4.38e-01 100.0% 56.5%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.64 50.0 3.41e-01 89.8% 30.8%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 53.0 4.69e-01 100.0% 86.3%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 54.0 5.22e-01 100.0% 83.9%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 56.0 4.97e-01 100.0% 69.0%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 55.0 5.46e-01 100.0% 96.1%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 53.0 4.84e-01 98.0% 75.0%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 5.16e-01 100.0% 95.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 54.0 5.18e-01 100.0% 100.0%
2k49A00 2.30.29.80 Mainly Beta › Roll › PH-domain like › 0.63 47.0 3.65e-01 83.7% 82.2%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.62 50.0 4.67e-01 100.0% 80.6%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.61 50.0 5.05e-01 95.9% 95.8%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 4.76e-01 100.0% 91.2%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.61 49.0 4.63e-01 100.0% 74.2%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 52.0 5.26e-01 100.0% 98.0%
6jwfA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.60 51.0 3.00e-01 95.9% 17.5%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.26e-01 100.0% 67.9%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.59 49.0 4.90e-01 98.0% 92.3%
1wdiA02 2.40.10.240 Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like 0.59 42.0 3.83e-01 100.0% 53.4%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 4.66e-01 98.0% 83.9%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.59 48.0 4.03e-01 100.0% 63.2%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.59 48.0 4.67e-01 100.0% 98.3%
2sfaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 46.0 3.81e-01 98.0% 48.4%
2hjjA00 3.30.160.130 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains 0.58 48.0 4.35e-01 91.8% 69.7%
3vskA01 3.90.1310.10 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) 0.58 45.0 3.29e-01 85.7% 85.0%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 46.0 4.38e-01 95.9% 98.3%
3q39B02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.58 49.0 3.87e-01 100.0% 50.0%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 48.0 4.54e-01 100.0% 77.8%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 45.0 4.37e-01 98.0% 81.7%
2k7iA01 3.30.160.160 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like 0.57 46.0 4.70e-01 95.9% 93.8%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.71e-01 100.0% 78.7%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 44.0 4.08e-01 95.9% 81.4%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 47.0 4.37e-01 100.0% 75.4%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 44.0 4.47e-01 93.9% 100.0%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.55 41.0 3.12e-01 85.7% 44.4%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 42.0 3.65e-01 91.8% 95.3%
2dmcA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 39.0 3.52e-01 79.6% 91.9%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.54 42.0 2.81e-01 93.9% 43.5%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 42.0 2.79e-01 93.9% 38.2%
2iteA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 41.0 3.31e-01 95.9% 91.7%
2yzyA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.53 40.0 2.90e-01 87.8% 29.4%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.53 44.0 3.35e-01 100.0% 89.5%
2v90C00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.52 38.0 3.27e-01 85.7% 74.2%
3vcxA02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.52 35.0 3.49e-01 73.5% 69.8%
3jcuB02 3.10.680.10 Alpha Beta › Roll › Photosystem II CP47 reaction center protein › Photosystem II CP47 reaction center protein 0.50 42.0 3.01e-01 100.0% 34.7%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.50 39.0 3.94e-01 100.0% 98.0%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 38.0 3.07e-01 89.8% 86.8%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042892 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.72 63.0 5.93e-01 100.0% 88.3%
4481026 4.1.1.407 beta barrels › SH3 › SH3 › SH3 › PF29661 0.71 62.0 5.84e-01 100.0% 88.3%
3237859 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 61.0 5.88e-01 98.0% 90.9%
3172122 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 58.0 5.43e-01 93.9% 100.0%
3720772 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 60.0 5.39e-01 100.0% 90.0%
3256432 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 60.0 5.62e-01 98.0% 88.3%
3488995 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 60.0 5.50e-01 100.0% 95.4%
3222146 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.69 60.0 5.52e-01 100.0% 78.5%
4938828 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 58.0 5.46e-01 95.9% 80.0%
3555930 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.68 59.0 5.32e-01 100.0% 72.9%
4188237 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.68 47.0 4.57e-01 73.5% 81.8%
858452 4.1.1.476 beta barrels › SH3 › SH3 › SH3 › PF30873 0.68 57.0 4.66e-01 100.0% 50.0%
3901117 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.68 59.0 4.02e-01 100.0% 33.9%
3251940 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.67 58.0 5.07e-01 100.0% 73.3%
3486328 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.44e-01 98.0% 80.0%
3737903 4.1.1.286 beta barrels › SH3 › SH3 › SH3 › DUF7072 0.66 54.0 5.25e-01 91.8% 85.5%
3504417 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 56.0 4.60e-01 100.0% 52.2%
3230400 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 57.0 5.26e-01 100.0% 100.0%
3593222 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 4.82e-01 100.0% 59.8%
3879172 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 57.0 5.24e-01 100.0% 95.4%
4220126 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 54.0 4.68e-01 100.0% 65.9%
4944045 4.17.1.2 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase 0.65 53.0 4.91e-01 100.0% 70.0%
3323530 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.65 56.0 5.17e-01 100.0% 90.8%
3562174 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 55.0 4.33e-01 100.0% 46.0%
3169607 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.65 56.0 4.95e-01 100.0% 89.3%
3922679 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.65 52.0 5.26e-01 91.8% 92.0%
4026282 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 55.0 4.52e-01 100.0% 52.2%
4300864 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.65 53.0 3.12e-01 91.8% 53.3%
None 0.64 47.0 3.28e-01 79.6% 28.3%
4372288 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.64 56.0 5.28e-01 100.0% 81.7%
4026957 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 53.0 4.98e-01 100.0% 76.7%
3637508 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.64 55.0 5.04e-01 98.0% 86.2%
3281618 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.64 52.0 4.34e-01 100.0% 65.0%
3732571 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 55.0 5.25e-01 100.0% 90.0%
3348231 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 52.0 4.80e-01 100.0% 87.1%
3707929 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 52.0 3.70e-01 95.9% 46.3%
4079197 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 52.0 4.53e-01 100.0% 58.8%
3533770 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.63 51.0 4.07e-01 100.0% 43.8%
3850775 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.63 51.0 4.75e-01 100.0% 70.8%
3190835 4.1.1.286 beta barrels › SH3 › SH3 › SH3 › DUF7072 0.63 49.0 4.31e-01 98.0% 55.3%
3486327 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.95e-01 98.0% 80.0%
3597248 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 53.0 4.36e-01 100.0% 55.8%
3217772 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.46e-01 100.0% 83.5%
4580007 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.62 49.0 4.20e-01 89.8% 84.7%
3360888 5.1.4.298 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.62 53.0 3.06e-01 98.0% 10.1%
3366578 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.62 51.0 3.93e-01 98.0% 40.0%
4445574 4.1.1.361 beta barrels › SH3 › SH3 › SH3 › Tudor_KDM3B, PWWP_KDM3B, DUF7030 0.61 50.0 3.33e-01 100.0% 22.6%
4474739 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 49.0 4.49e-01 100.0% 78.7%
3651964 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.61 50.0 3.88e-01 98.0% 40.0%
4104915 4.1.1.245 beta barrels › SH3 › SH3 › SH3 › SspH 0.61 51.0 4.81e-01 98.0% 80.0%
3817060 109.4.1.1794 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.61 52.0 2.99e-01 98.0% 11.2%
3503973 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 48.0 3.75e-01 100.0% 80.0%
3910433 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.66e-01 100.0% 76.9%
3199259 4.1.1.286 beta barrels › SH3 › SH3 › SH3 › DUF7072 0.60 48.0 4.53e-01 95.9% 72.3%
4461457 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.60e-01 98.0% 78.1%
3931905 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 49.0 3.87e-01 98.0% 41.7%
4028300 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 51.0 4.02e-01 100.0% 75.5%
4470603 4.1.1.217 beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.60 49.0 3.53e-01 100.0% 29.7%
3440094 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.60 48.0 4.64e-01 100.0% 88.3%
3756428 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.60 49.0 4.05e-01 100.0% 50.0%
3866038 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.60 47.0 4.07e-01 98.0% 54.1%
4075769 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.60 47.0 4.59e-01 93.9% 85.5%
3259547 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 49.0 3.89e-01 100.0% 42.6%
3841414 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.59 50.0 4.57e-01 100.0% 74.3%
3743614 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.59 47.0 4.59e-01 100.0% 91.7%
3421158 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 47.0 4.58e-01 100.0% 81.7%
3714156 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 47.0 4.15e-01 100.0% 63.5%
3447802 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.58 44.0 3.70e-01 85.7% 75.6%
3525406 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.58 47.0 3.80e-01 100.0% 45.5%
3485965 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 46.0 4.48e-01 100.0% 83.3%
3943751 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 46.0 4.33e-01 100.0% 78.5%
3274582 4.1.1.365 beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C 0.57 47.0 4.59e-01 100.0% 89.1%
3795223 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 45.0 3.97e-01 100.0% 60.0%
3707634 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 44.0 4.32e-01 100.0% 85.5%
3407821 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 45.0 3.98e-01 100.0% 57.6%
3941391 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 43.0 4.12e-01 91.8% 75.0%
3469800 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 44.0 3.93e-01 98.0% 75.0%
4246480 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.56 43.0 3.63e-01 100.0% 47.4%
3389175 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 44.0 3.83e-01 100.0% 54.4%
3579591 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.54 42.0 4.20e-01 100.0% 90.9%
5070958 10.1.1.41 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH43_C2 0.54 43.0 3.03e-01 100.0% 64.5%
4204596 3744.1.1.1 a+b two layers › Photosystem II antenna protein PsbB insertion domain › Photosystem II antenna protein PsbB insertion domain › Photosystem II antenna protein PsbB insertion domain › PSII 0.52 40.0 3.30e-01 100.0% 50.0%
D2 high residues 64-160
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.75 40.0 4.80e-01 89.7% 77.3%
3r8qA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.73 45.0 4.65e-01 100.0% 66.7%
2dm4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 43.0 4.44e-01 100.0% 61.7%
2dn7A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 43.0 4.21e-01 100.0% 56.1%
3lqmA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 43.0 4.22e-01 100.0% 57.8%
2jllA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 43.0 4.33e-01 100.0% 61.2%
1tdqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 44.0 4.59e-01 100.0% 68.9%
2edyA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 42.0 4.13e-01 100.0% 57.3%
1j5yA02 3.30.1340.20 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 3H domain 0.68 37.0 3.62e-01 89.7% 47.7%
4lsdF00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 42.0 4.22e-01 100.0% 63.3%
4gs7C02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 43.0 4.37e-01 100.0% 66.3%
2ee3A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 40.0 3.89e-01 100.0% 54.6%
2e3vA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 43.0 4.22e-01 100.0% 63.1%
2v5yA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 42.0 4.14e-01 100.0% 61.8%
5e55B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 42.0 4.27e-01 100.0% 67.7%
1x5lA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 40.0 4.21e-01 100.0% 69.3%
5mybA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 41.0 4.13e-01 100.0% 65.6%
1n26A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 41.0 4.01e-01 100.0% 60.6%
1dgsA02 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.62 44.0 4.49e-01 95.9% 74.7%
7y8sB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 39.0 4.13e-01 100.0% 72.4%
4p04A01 2.60.40.3100 Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain 0.61 39.0 3.81e-01 99.0% 59.4%
1dikA01 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.60 42.0 3.57e-01 90.7% 45.8%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 40.0 4.11e-01 99.0% 71.6%
2b39A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.58 33.0 3.11e-01 99.0% 46.6%
4gc8B00 3.40.1550.10 Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like 0.55 43.0 3.52e-01 92.8% 46.6%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 38.0 3.57e-01 100.0% 59.5%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.54 35.0 3.85e-01 88.7% 82.9%
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 39.0 3.45e-01 99.0% 51.0%
2hp7A00 3.40.1550.10 Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like 0.50 41.0 3.40e-01 92.8% 48.6%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.50 43.0 4.44e-01 96.9% 97.8%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3913598 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.73 45.0 4.44e-01 100.0% 58.1%
3528266 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.72 44.0 4.59e-01 100.0% 65.6%
3927631 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 43.0 4.50e-01 100.0% 64.4%
3234020 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.72 44.0 4.61e-01 100.0% 66.7%
4506741 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.72 44.0 4.56e-01 100.0% 65.6%
3622826 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.72 44.0 4.41e-01 100.0% 60.0%
3854518 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.71 44.0 4.27e-01 100.0% 56.2%
3856065 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.71 44.0 4.13e-01 100.0% 52.2%
3922241 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.71 43.0 4.47e-01 100.0% 65.6%
3226166 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.70 43.0 4.38e-01 100.0% 62.1%
3891536 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.70 43.0 4.46e-01 100.0% 65.6%
3885092 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.70 43.0 4.51e-01 100.0% 66.7%
2775610 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.70 43.0 4.30e-01 100.0% 59.4%
4928621 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.70 51.0 4.44e-01 89.7% 52.1%
3886029 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.70 43.0 4.32e-01 100.0% 60.0%
4151900 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.69 50.0 4.29e-01 88.7% 50.0%
3212170 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.69 43.0 4.40e-01 100.0% 64.2%
5049794 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.69 50.0 4.31e-01 88.7% 50.3%
3891509 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.69 42.0 4.28e-01 100.0% 62.1%
3567581 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.68 43.0 4.43e-01 100.0% 67.8%
3905578 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 46.0 4.52e-01 100.0% 64.8%
4943252 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.66 48.0 4.14e-01 88.7% 50.3%
5034902 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.65 45.0 3.92e-01 88.7% 47.6%
4945577 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.65 42.0 4.93e-01 93.8% 96.9%
5010624 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 42.0 3.48e-01 99.0% 37.4%
3561900 11.1.1.610 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_DSCAM-DSCAML_C 0.64 39.0 3.85e-01 100.0% 55.2%
3666673 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 47.0 5.24e-01 97.9% 98.7%
5027350 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.62 43.0 3.84e-01 88.7% 50.7%
4958689 821.1.1.14 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 0.61 34.0 4.17e-01 90.7% 88.3%
3504586 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.61 41.0 3.59e-01 88.7% 43.9%
3924006 11.2.1.52 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem 0.60 42.0 3.75e-01 100.0% 50.7%
3580780 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.60 37.0 3.62e-01 100.0% 54.5%
3573951 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.60 43.0 4.13e-01 100.0% 66.4%
3980153 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.59 38.0 3.41e-01 81.4% 45.0%
4979507 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.59 47.0 4.05e-01 85.6% 64.4%
3766383 304.48.1.6 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A 0.58 53.0 4.93e-01 97.9% 100.0%
3927539 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 41.0 4.20e-01 100.0% 77.9%
5067865 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.55 35.0 4.08e-01 89.7% 90.0%
4969863 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.54 35.0 3.87e-01 89.7% 84.0%
4013514 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.54 35.0 3.47e-01 89.7% 61.0%
4489065 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.53 37.0 3.39e-01 95.9% 54.4%
4057352 1119.1.1.1 a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.53 45.0 3.29e-01 90.7% 96.9%
3433812 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.51 36.0 3.27e-01 96.9% 52.6%