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MN988487.1__QIG68211.1__EVB56_020__00020
Bact-VirMN988487.1__QIG68211.1__EVB56_020__00020
Identity
- Accession:
- MN988487 ↗
- Kingdom:
- phage
Quality
68.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-53
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zq3P00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 54.0 | 4.95e-01 | 100.0% | 63.2% |
| 1vw4801 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.65 | 56.0 | 4.97e-01 | 96.1% | 78.1% |
| 4d7rA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.65 | 51.0 | 4.50e-01 | 100.0% | 57.3% |
| 1o4xA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 46.0 | 4.62e-01 | 100.0% | 79.6% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 46.0 | 4.70e-01 | 100.0% | 91.5% |
| 1e3oC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 45.0 | 4.59e-01 | 96.1% | 85.4% |
| 2dn0A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 45.0 | 4.15e-01 | 100.0% | 56.6% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 44.0 | 4.53e-01 | 100.0% | 83.3% |
| 2gxaE01 | 1.10.10.510 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain | 0.62 | 50.0 | 4.59e-01 | 100.0% | 76.7% |
| 2doeA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.60 | 47.0 | 4.20e-01 | 100.0% | 57.8% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 46.0 | 4.73e-01 | 100.0% | 95.8% |
| 1ci4A00 | 1.10.150.40 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Barrier-to-autointegration factor, BAF | 0.59 | 48.0 | 4.20e-01 | 100.0% | 76.1% |
| 5kp7B00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.58 | 49.0 | 4.36e-01 | 100.0% | 82.3% |
| 4dccA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 49.0 | 4.41e-01 | 100.0% | 71.6% |
| 7vw6B01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.57 | 44.0 | 4.15e-01 | 100.0% | 70.1% |
| 8e9gE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.57 | 46.0 | 4.45e-01 | 100.0% | 81.0% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.55 | 46.0 | 3.61e-01 | 100.0% | 63.9% |
| 3mfiA03 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.55 | 44.0 | 4.02e-01 | 100.0% | 80.3% |
| 3t8vA05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.54 | 46.0 | 2.81e-01 | 100.0% | 15.0% |
| 3juiA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 42.0 | 3.14e-01 | 100.0% | 29.9% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 38.0 | 3.53e-01 | 100.0% | 55.1% |
| 2hnhA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.52 | 42.0 | 2.73e-01 | 94.1% | 82.2% |
| 2vl7A02 | 1.10.275.30 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › | 0.52 | 37.0 | 2.99e-01 | 78.4% | 77.3% |
| 4g1tA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 39.0 | 3.76e-01 | 94.1% | 72.1% |
| 1bo9A00 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.51 | 40.0 | 3.68e-01 | 100.0% | 63.0% |
| 3tbiA00 | 1.10.10.2850 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phage late-transcription coactivator-like | 0.51 | 40.0 | 3.72e-01 | 96.1% | 71.8% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 40.0 | 3.37e-01 | 96.1% | 74.3% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.50 | 42.0 | 3.74e-01 | 100.0% | 79.0% |
| 2c42A03 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.50 | 40.0 | 2.80e-01 | 100.0% | 86.3% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.50 | 43.0 | 3.79e-01 | 100.0% | 78.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3704050 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 52.0 | 5.28e-01 | 98.0% | 82.0% |
| 3244523 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 51.0 | 5.16e-01 | 100.0% | 84.0% |
| 3696367 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 58.0 | 5.18e-01 | 100.0% | 73.3% |
| 3886164 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.66 | 48.0 | 4.87e-01 | 100.0% | 84.0% |
| 3216569 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.66 | 49.0 | 4.83e-01 | 100.0% | 78.2% |
| 4995716 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.65 | 53.0 | 5.11e-01 | 100.0% | 81.7% |
| 3994528 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.65 | 49.0 | 4.69e-01 | 100.0% | 71.7% |
| 3264072 | 101.1.1.70 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SANT_DAMP1_like | 0.64 | 53.0 | 4.22e-01 | 100.0% | 44.5% |
| 4021919 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 51.0 | 4.87e-01 | 100.0% | 89.2% |
| 4507639 | 102.1.2.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase | 0.61 | 50.0 | 4.53e-01 | 100.0% | 73.3% |
| 3612081 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.60 | 48.0 | 4.57e-01 | 100.0% | 75.4% |
| 4674912 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 49.0 | 4.12e-01 | 100.0% | 63.2% |
| 4927329 | 6049.1.1.0 ↗ | alpha bundles › PH0832-like › PH0832-like › PH0832-like | 0.58 | 43.0 | 3.71e-01 | 86.3% | 96.7% |
| 3602632 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.57 | 49.0 | 3.39e-01 | 100.0% | 61.6% |
| 4934796 | 6049.1.1.0 ↗ | alpha bundles › PH0832-like › PH0832-like › PH0832-like | 0.56 | 42.0 | 3.62e-01 | 86.3% | 74.4% |
| 4946571 | 2008.1.1.85 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII | 0.55 | 44.0 | 3.09e-01 | 100.0% | 99.5% |
| 3707326 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.53 | 41.0 | 3.17e-01 | 96.1% | 85.3% |
| 3224794 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.53 | 39.0 | 3.57e-01 | 86.3% | 72.0% |
| 3510785 | 3345.1.1.1 ↗ | alpha arrays › MRG domain › MRG domain › MRG domain › MRG | 0.52 | 38.0 | 2.86e-01 | 86.3% | 52.9% |
| 3348578 | 109.4.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › 14-3-3 | 0.52 | 39.0 | 2.57e-01 | 88.2% | 17.6% |
| 3761666 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 42.0 | 2.79e-01 | 100.0% | 44.8% |