←Back to structures
MN988487.1__QIG68240.1__EVB56_049__00049
Bact-VirMN988487.1__QIG68240.1__EVB56_049__00049
Identity
- Accession:
- MN988487 ↗
- Kingdom:
- phage
Quality
68.7
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-63
Domain cluster:
rep: OP617743.1__UYL04760.1__EBOKLHFM_00140__00140__D8-70
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 45.0 | 3.81e-01 | 100.0% | 47.1% |
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.59 | 39.0 | 3.97e-01 | 81.4% | 70.2% |
| 2k2dA00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.59 | 37.0 | 4.04e-01 | 78.0% | 80.9% |
| 2yvsA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.57 | 49.0 | 4.01e-01 | 100.0% | 86.0% |
| 5owvD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 45.0 | 3.03e-01 | 93.2% | 23.0% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 47.0 | 4.69e-01 | 91.5% | 90.0% |
| 4grfA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 42.0 | 3.30e-01 | 84.7% | 74.3% |
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 43.0 | 4.63e-01 | 83.1% | 100.0% |
| 2l6oA01 | 2.40.10.320 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Uncharacterised protein PF13642 yp_926445, N-terminal domain | 0.55 | 41.0 | 3.91e-01 | 91.5% | 68.1% |
| 4o1sA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.54 | 43.0 | 3.21e-01 | 93.2% | 87.6% |
| 3mb5A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.54 | 41.0 | 4.07e-01 | 86.4% | 98.4% |
| 2d93A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 42.0 | 3.37e-01 | 100.0% | 41.0% |
| 3m1cA04 | 2.60.40.3190 | Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain | 0.53 | 43.0 | 3.51e-01 | 100.0% | 70.5% |
| 5c3pD00 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.52 | 42.0 | 2.81e-01 | 100.0% | 25.7% |
| 5eqjB01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.52 | 40.0 | 3.82e-01 | 86.4% | 87.3% |
| 1q98A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 39.0 | 3.03e-01 | 89.8% | 64.0% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.51 | 44.0 | 3.59e-01 | 100.0% | 66.7% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 40.0 | 3.97e-01 | 88.1% | 90.3% |
| 7wdtA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 43.0 | 3.29e-01 | 100.0% | 94.7% |
| 3fmaA00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.50 | 40.0 | 3.70e-01 | 91.5% | 74.1% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3415617 | 379.1.1.1 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 | 0.67 | 45.0 | 4.80e-01 | 81.4% | 82.0% |
| 4321108 | 4187.2.1.0 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 | 0.61 | 49.0 | 5.08e-01 | 100.0% | 96.4% |
| 3179802 | 4027.1.1.0 ↗ | beta barrels › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit | 0.59 | 36.0 | 4.28e-01 | 79.7% | 92.5% |
| 3635320 | 4027.1.1.0 ↗ | beta barrels › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit | 0.58 | 37.0 | 4.09e-01 | 81.4% | 84.4% |
| 4022833 | 4027.1.1.0 ↗ | beta barrels › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit | 0.58 | 36.0 | 4.27e-01 | 81.4% | 95.0% |
| 3536595 | 2004.1.1.413 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Tudor_2 | 0.57 | 42.0 | 3.29e-01 | 79.7% | 43.1% |
| 1173366 | 217.1.1.0 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain | 0.57 | 49.0 | 4.01e-01 | 100.0% | 86.0% |
| 3901437 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.57 | 42.0 | 4.23e-01 | 79.7% | 93.3% |
| 3998546 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 41.0 | 4.12e-01 | 78.0% | 96.7% |
| 3625817 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.57 | 49.0 | 4.49e-01 | 100.0% | 83.7% |
| 4994 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.57 | 40.0 | 3.68e-01 | 86.4% | 56.4% |
| 3804735 | 822.1.1.3 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF_ATXR3 | 0.56 | 38.0 | 3.88e-01 | 84.7% | 71.2% |
| 3489512 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 40.0 | 4.06e-01 | 79.7% | 93.3% |
| 5013683 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 44.0 | 4.47e-01 | 89.8% | 90.0% |
| 3907190 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.55 | 45.0 | 3.83e-01 | 89.8% | 66.3% |
| 3547884 | 389.1.2.7 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › THBD | 0.55 | 36.0 | 3.44e-01 | 94.9% | 57.1% |
| 5053432 | 1.1.7.22 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Peptidase_M42 | 0.54 | 45.0 | 3.99e-01 | 100.0% | 97.9% |
| 5009968 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.53 | 40.0 | 3.59e-01 | 91.5% | 57.6% |
| 3196947 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 46.0 | 2.64e-01 | 100.0% | 13.0% |
| 3392470 | 4027.1.1.0 ↗ | beta barrels › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit | 0.52 | 34.0 | 3.82e-01 | 88.1% | 88.9% |
| 379802 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.52 | 40.0 | 3.58e-01 | 84.7% | 61.6% |
| 4217174 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 43.0 | 4.14e-01 | 100.0% | 91.4% |
| 3596623 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.51 | 41.0 | 3.71e-01 | 96.6% | 97.8% |
| 4013442 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.50 | 42.0 | 3.82e-01 | 98.3% | 100.0% |