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MN988487.1__QIG68242.1__EVB56_051__00051
Bact-VirMN988487.1__QIG68242.1__EVB56_051__00051
Identity
- Accession:
- MN988487 ↗
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-116
Domain cluster:
rep: KT724718.1__ALJ98288.1__BiPBO1_74__00074__D25-121
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ic8A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 48.0 | 5.20e-01 | 78.1% | 78.7% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.72 | 34.0 | 3.62e-01 | 70.2% | 50.5% |
| 4nqfA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.65 | 51.0 | 4.75e-01 | 85.1% | 82.8% |
| 1bdgA01 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.63 | 44.0 | 3.30e-01 | 71.1% | 38.4% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 41.0 | 3.24e-01 | 71.9% | 34.7% |
| 1s4kA00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.59 | 44.0 | 4.35e-01 | 78.1% | 100.0% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 35.0 | 3.68e-01 | 71.1% | 65.0% |
| 4dvyP03 | 1.20.120.1270 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CagA exotoxin domain III | 0.58 | 42.0 | 3.73e-01 | 88.6% | 52.4% |
| 3qf3D00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.58 | 44.0 | 4.29e-01 | 81.6% | 81.2% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 43.0 | 4.26e-01 | 77.2% | 86.4% |
| 6p73A02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 42.0 | 3.85e-01 | 77.2% | 64.3% |
| 2g80A02 | 1.10.720.60 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.56 | 37.0 | 4.36e-01 | 71.9% | 98.7% |
| 2xhsA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.54 | 41.0 | 3.24e-01 | 79.8% | 89.3% |
| 4iuwA02 | 1.10.1380.10 | Mainly Alpha › Orthogonal Bundle › Neutral endopeptidase; domain 2 › Neutral endopeptidase , domain2 | 0.54 | 40.0 | 2.86e-01 | 78.1% | 53.4% |
| 3edvB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 43.0 | 3.99e-01 | 85.1% | 83.8% |
| 1p8dB00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.52 | 36.0 | 2.85e-01 | 70.2% | 59.0% |
| 5olkB01 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.52 | 41.0 | 3.11e-01 | 85.1% | 59.1% |
| 3lynB00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.52 | 38.0 | 3.77e-01 | 78.1% | 79.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3770218 | 101.1.4.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou | 0.67 | 49.0 | 5.16e-01 | 78.1% | 84.5% |
| 3285506 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.66 | 45.0 | 4.64e-01 | 71.9% | 74.3% |
| 4020966 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.62 | 42.0 | 4.26e-01 | 92.1% | 69.6% |
| 3992404 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.61 | 36.0 | 4.21e-01 | 72.8% | 80.0% |
| 3391937 | 109.4.1.141 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MRP-S27 | 0.57 | 47.0 | 3.43e-01 | 86.0% | 95.6% |
| 5051840 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.57 | 39.0 | 4.49e-01 | 85.1% | 95.3% |
| 5046473 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.56 | 38.0 | 4.12e-01 | 86.0% | 86.7% |
| 3613860 | 601.1.2.105 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Transmemb_17 | 0.55 | 38.0 | 3.55e-01 | 71.1% | 98.6% |
| 3594799 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 39.0 | 3.00e-01 | 73.7% | 38.9% |
| 3519620 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.54 | 35.0 | 3.59e-01 | 78.1% | 66.4% |
| 3998828 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 40.0 | 3.76e-01 | 78.1% | 77.1% |
| 3175421 | 3922.1.1.312 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PF30554 | 0.53 | 39.0 | 3.65e-01 | 94.7% | 62.1% |
| 3716491 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.53 | 43.0 | 3.44e-01 | 88.6% | 72.8% |
| None | — | 0.53 | 37.0 | 2.94e-01 | 71.1% | 42.7% | |
| 3976215 | 105.2.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C | 0.52 | 37.0 | 3.31e-01 | 72.8% | 91.6% |
| 4570654 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.52 | 43.0 | 3.59e-01 | 87.7% | 54.2% |
| 5025251 | 5051.1.1.2 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease | 0.51 | 44.0 | 2.98e-01 | 96.5% | 77.6% |
| 3926085 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.51 | 40.0 | 4.34e-01 | 83.3% | 94.0% |