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MN988490.1__QIG68352.1__EVB59_018__00018
Bact-VirMN988490.1__QIG68352.1__EVB59_018__00018
Identity
- Accession:
- MN988490 ↗
- Kingdom:
- phage
Quality
92.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-153
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4q6bA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 38.0 | 3.94e-01 | 79.3% | 54.5% |
| 3szuA03 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.69 | 32.0 | 3.72e-01 | 78.6% | 59.0% |
| 5fbhA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 36.0 | 3.30e-01 | 77.1% | 40.6% |
| 2e4uA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 36.0 | 3.35e-01 | 77.1% | 43.9% |
| 3l49A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 38.0 | 3.75e-01 | 77.9% | 56.5% |
| 1zjcA01 | 3.40.1830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Thermophilic metalloprotease-like › Thermophilic metalloprotease (M29) | 0.61 | 38.0 | 3.51e-01 | 77.1% | 47.8% |
| 3d02A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 37.0 | 3.58e-01 | 77.1% | 53.6% |
| 3hl0A01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 32.0 | 3.10e-01 | 78.6% | 42.8% |
| 1tjyA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 35.0 | 3.47e-01 | 77.9% | 52.3% |
| 1g01A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 44.0 | 3.25e-01 | 77.1% | 70.3% |
| 4l80D00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.59 | 43.0 | 3.24e-01 | 76.4% | 60.8% |
| 6iubA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 44.0 | 3.57e-01 | 78.6% | 96.6% |
| 1cz1A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 44.0 | 3.17e-01 | 77.9% | 85.5% |
| 4ee9A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 44.0 | 3.41e-01 | 80.7% | 94.7% |
| 3aysA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 43.0 | 3.24e-01 | 77.9% | 79.8% |
| 1tg7A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 41.0 | 3.10e-01 | 74.3% | 58.0% |
| 1pbgA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 43.0 | 3.03e-01 | 78.6% | 83.9% |
| 3d3aA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 42.0 | 3.37e-01 | 76.4% | 89.1% |
| 4tvvC00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 39.0 | 3.13e-01 | 70.0% | 82.4% |
| 3duwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 32.0 | 2.80e-01 | 77.9% | 35.6% |
| 2b81C00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.55 | 40.0 | 3.13e-01 | 76.4% | 82.4% |
| 8g3hA01 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.55 | 41.0 | 3.23e-01 | 77.9% | 87.1% |
| 1edzA02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.54 | 32.0 | 3.32e-01 | 75.7% | 61.1% |
| 3rcyA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.54 | 40.0 | 3.31e-01 | 77.9% | 75.2% |
| 6gvdA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 40.0 | 3.03e-01 | 77.1% | 61.5% |
| 1xoiA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 38.0 | 2.70e-01 | 74.3% | 88.8% |
| 1bqcA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 40.0 | 3.17e-01 | 78.6% | 57.0% |
| 6ei9A01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 38.0 | 3.32e-01 | 74.3% | 67.4% |
| 1byiA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 39.0 | 3.38e-01 | 77.9% | 96.9% |
| 1hl8A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 39.0 | 3.01e-01 | 77.9% | 69.0% |
| 2ozeA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 39.0 | 3.17e-01 | 80.0% | 88.7% |
| 2cunA01 | 3.40.50.1260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain | 0.51 | 38.0 | 3.40e-01 | 77.1% | 61.3% |
| 1g60B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 38.0 | 3.24e-01 | 76.4% | 76.3% |
| 1kc0A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 46.0 | 3.63e-01 | 100.0% | 66.8% |
| 4impA02 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 43.0 | 3.80e-01 | 92.9% | 83.9% |
| 2x6rB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 37.0 | 3.22e-01 | 75.0% | 52.6% |
| 5kolD00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.50 | 33.0 | 3.14e-01 | 77.1% | 53.5% |
| 2a9sB00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.50 | 34.0 | 3.28e-01 | 77.1% | 58.2% |
| 3q3vA01 | 3.40.50.1260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain | 0.50 | 36.0 | 3.39e-01 | 73.6% | 79.7% |
| 3kzsA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 39.0 | 3.27e-01 | 80.7% | 72.3% |
| 3c8zA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 37.0 | 2.90e-01 | 77.1% | 62.0% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3416022 | 2007.1.2.30 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › IR75A_N | 0.66 | 42.0 | 3.65e-01 | 76.4% | 42.9% |
| 4975517 | 2004.1.1.97 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB | 0.61 | 37.0 | 3.38e-01 | 78.6% | 45.9% |
| 5051548 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 41.0 | 3.07e-01 | 70.0% | 67.6% |
| 4229452 | 2004.1.1.201 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 | 0.58 | 44.0 | 3.70e-01 | 80.0% | 96.7% |
| 5042460 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 39.0 | 3.58e-01 | 78.6% | 51.4% |
| 4981995 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 35.0 | 3.34e-01 | 85.0% | 50.6% |
| 1158433 | 2002.1.1.63 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_35 | 0.58 | 43.0 | 3.25e-01 | 77.9% | 72.9% |
| None | — | 0.58 | 43.0 | 3.20e-01 | 77.9% | 69.3% | |
| None | — | 0.58 | 43.0 | 3.18e-01 | 77.1% | 76.7% | |
| 5045091 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.57 | 42.0 | 3.40e-01 | 77.1% | 89.3% |
| 4221077 | 2002.1.1.12 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_1 | 0.57 | 43.0 | 2.99e-01 | 78.6% | 75.3% |
| None | — | 0.57 | 42.0 | 3.16e-01 | 77.9% | 68.7% | |
| 4179219 | 2002.1.1.12 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_1 | 0.57 | 43.0 | 3.00e-01 | 79.3% | 84.6% |
| 3829808 | 300.1.1.16 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc, PLDc_2 | 0.57 | 51.0 | 3.37e-01 | 100.0% | 37.6% |
| 3372677 | 300.1.1.16 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc, PLDc_2 | 0.56 | 51.0 | 3.31e-01 | 100.0% | 38.5% |
| 4517517 | 2002.1.1.8 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Cellulase | 0.56 | 43.0 | 3.09e-01 | 78.6% | 65.0% |
| 4142789 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.56 | 41.0 | 3.04e-01 | 74.3% | 51.9% |
| 3864610 | 207.1.1.126 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PRAME_C | 0.56 | 36.0 | 2.83e-01 | 93.6% | 30.2% |
| 4233739 | 2004.1.1.201 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 | 0.55 | 37.0 | 3.20e-01 | 78.6% | 43.2% |
| 4996461 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.55 | 34.0 | 3.55e-01 | 77.1% | 65.4% |
| 5006612 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.55 | 40.0 | 3.15e-01 | 76.4% | 55.3% |
| 5044185 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 40.0 | 3.47e-01 | 77.1% | 97.7% |
| 4064642 | 2004.1.1.201 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 | 0.53 | 36.0 | 3.04e-01 | 78.6% | 41.8% |
| 3821669 | 2003.1.1.21 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase,DUF1731 | 0.53 | 48.0 | 3.72e-01 | 100.0% | 65.5% |
| 5042888 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.53 | 44.0 | 2.98e-01 | 88.6% | 50.9% |
| 3821593 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.52 | 37.0 | 3.32e-01 | 72.9% | 62.5% |
| 3720307 | 2003.1.1.84 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PRISE | 0.52 | 45.0 | 3.36e-01 | 95.7% | 64.3% |
| 3980461 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.52 | 39.0 | 3.18e-01 | 78.6% | 71.5% |
| 3440155 | 2003.1.5.121 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF1442 | 0.52 | 36.0 | 3.14e-01 | 77.1% | 46.5% |
| 3701975 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.52 | 38.0 | 3.01e-01 | 75.7% | 71.2% |
| 4548053 | 2004.1.1.201 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 | 0.52 | 35.0 | 2.92e-01 | 78.6% | 40.0% |
| 5062313 | 2006.1.6.45 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 | 0.52 | 37.0 | 3.29e-01 | 73.6% | 72.2% |
| 5050214 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 38.0 | 2.98e-01 | 77.9% | 36.1% |
| 5029246 | 7546.1.1.1 ↗ | a/b three-layered sandwiches › Glutaminase/Asparaginase N-terminal domain › Glutaminase/Asparaginase N-terminal domain › Glutaminase/Asparaginase N-terminal domain › Asparaginase | 0.51 | 45.0 | 3.95e-01 | 94.3% | 76.1% |
| 5031301 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.51 | 37.0 | 3.63e-01 | 74.3% | 90.0% |
| 5050361 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.51 | 39.0 | 2.87e-01 | 81.4% | 33.1% |
| 3272724 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.51 | 38.0 | 2.89e-01 | 77.1% | 65.7% |
| 5005019 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.51 | 39.0 | 2.88e-01 | 81.4% | 50.6% |
| 5014887 | 7546.1.1.1 ↗ | a/b three-layered sandwiches › Glutaminase/Asparaginase N-terminal domain › Glutaminase/Asparaginase N-terminal domain › Glutaminase/Asparaginase N-terminal domain › Asparaginase | 0.50 | 40.0 | 3.56e-01 | 84.3% | 82.0% |