←Back to structures
MN988496.1__QIG68667.1__EVB67_017__00017
Bact-VirMN988496.1__QIG68667.1__EVB67_017__00017
Identity
- Accession:
- MN988496 ↗
- Kingdom:
- phage
Quality
95.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-63
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vwxA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 53.0 | 4.95e-01 | 83.9% | 91.3% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 48.0 | 4.31e-01 | 79.0% | 74.4% |
| 2fvgA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.65 | 46.0 | 4.36e-01 | 75.8% | 100.0% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 49.0 | 3.86e-01 | 83.9% | 42.3% |
| 1xv2C01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.63 | 51.0 | 4.33e-01 | 93.5% | 90.1% |
| 1yzbA01 | 3.90.70.40 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.62 | 49.0 | 4.01e-01 | 90.3% | 84.7% |
| 3hurA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.61 | 48.0 | 3.59e-01 | 87.1% | 57.8% |
| 4g6iC02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.59 | 43.0 | 3.86e-01 | 80.6% | 90.4% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 43.0 | 4.27e-01 | 85.5% | 100.0% |
| 1l5jA02 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.57 | 41.0 | 2.91e-01 | 77.4% | 50.5% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 44.0 | 4.36e-01 | 90.3% | 100.0% |
| 4tvcA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.54 | 41.0 | 2.93e-01 | 82.3% | 36.7% |
| 2x8kA03 | 2.60.120.860 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 41.0 | 3.44e-01 | 85.5% | 92.8% |
| 4uopA01 | 3.30.1120.170 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 38.0 | 3.40e-01 | 77.4% | 78.5% |
| 5cxmA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.53 | 38.0 | 3.36e-01 | 79.0% | 70.7% |
| 1xffA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.50 | 37.0 | 2.60e-01 | 83.9% | 55.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1142005 | 1.1.7.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Rep_1B | 0.74 | 57.0 | 6.07e-01 | 80.6% | 98.1% |
| 2773985 | 219.1.1.43 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CoV_peptidase | 0.66 | 54.0 | 3.62e-01 | 91.9% | 58.9% |
| 3759212 | 10.32.1.1 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B | 0.64 | 54.0 | 3.96e-01 | 100.0% | 60.0% |
| 6452 | 4111.1.1.1 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AAL_decarboxy | 0.64 | 48.0 | 4.57e-01 | 85.5% | 84.4% |
| 3999182 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.61 | 43.0 | 3.95e-01 | 74.2% | 81.2% |
| 4217227 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.59 | 43.0 | 4.25e-01 | 80.6% | 92.9% |
| 4482074 | 7567.1.1.1 ↗ | a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L | 0.54 | 39.0 | 2.61e-01 | 82.3% | 69.2% |
| 4021058 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.52 | 40.0 | 3.41e-01 | 82.3% | 95.2% |
| 3781393 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.51 | 37.0 | 3.35e-01 | 77.4% | 96.4% |
| 3757995 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.50 | 40.0 | 3.18e-01 | 98.4% | 75.6% |