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MN988500.1__QIG68934.1__EVB71_082__00082

Bact-Vir

MN988500.1__QIG68934.1__EVB71_082__00082

Identity

Accession:
MN988500 ↗
Kingdom:
phage

Quality

67.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-50
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dmrA03 3.90.55.10 Alpha Beta › Alpha-Beta Complex › Dimethylsulfoxide Reductase; domain 3 › Dimethylsulfoxide Reductase, domain 3 0.77 44.0 3.62e-01 75.5% 32.2%
1w4vA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 57.0 4.42e-01 100.0% 78.2%
2ywwA01 3.30.70.140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aspartate carbamoyltransferase regulatory subunit, N-terminal domain 0.64 48.0 3.85e-01 79.6% 92.3%
1tmoA03 3.90.55.10 Alpha Beta › Alpha-Beta Complex › Dimethylsulfoxide Reductase; domain 3 › Dimethylsulfoxide Reductase, domain 3 0.63 38.0 3.21e-01 75.5% 32.6%
1pzxA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.63 55.0 4.09e-01 100.0% 41.0%
1urmA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 51.0 3.66e-01 98.0% 79.6%
6lpbR01 4.10.1240.10 Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain 0.62 44.0 3.67e-01 75.5% 44.8%
6cz7A01 2.20.25.90 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains 0.62 47.0 4.32e-01 81.6% 64.5%
2dt8A02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.62 55.0 3.99e-01 100.0% 46.2%
7xoiD01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 42.0 3.34e-01 75.5% 33.6%
3nyiA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.60 52.0 3.79e-01 100.0% 43.8%
3ecfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 43.0 3.21e-01 77.6% 29.7%
1e2tA02 3.30.1120.150 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.60 41.0 3.47e-01 100.0% 41.9%
7vqxR01 4.10.1240.10 Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain 0.59 41.0 3.57e-01 75.5% 44.0%
2pwjA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 46.0 3.43e-01 98.0% 78.4%
8gtyA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.59 51.0 3.49e-01 100.0% 33.5%
1ha6A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 42.0 3.78e-01 91.8% 55.7%
5u81A01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.57 49.0 3.14e-01 100.0% 39.4%
5nr1A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 46.0 3.81e-01 100.0% 74.5%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 49.0 3.91e-01 100.0% 79.8%
3fogA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 48.0 3.80e-01 98.0% 88.2%
2vszB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 47.0 3.65e-01 100.0% 47.0%
2hvwA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.55 45.0 3.38e-01 100.0% 53.1%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.54 44.0 4.02e-01 100.0% 71.8%
4emtA02 3.40.50.12100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein 0.54 46.0 3.47e-01 100.0% 79.1%
2p1jA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 46.0 3.44e-01 100.0% 58.0%
5cflA02 3.40.50.12100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein 0.53 42.0 3.18e-01 100.0% 75.5%
7x3hA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 43.0 3.36e-01 98.0% 76.7%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4163371 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.77 51.0 4.64e-01 79.6% 52.3%
4175039 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.77 50.0 4.87e-01 77.6% 60.0%
5014020 1001.1.1.1 a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 0.77 48.0 5.00e-01 73.5% 68.9%
4473128 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.76 50.0 4.58e-01 79.6% 52.3%
4104868 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.75 50.0 4.56e-01 79.6% 52.3%
4369577 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.75 50.0 4.66e-01 79.6% 56.7%
4584323 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.73 48.0 4.50e-01 77.6% 55.0%
3705941 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.73 63.0 5.39e-01 100.0% 62.5%
4086202 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.72 48.0 4.42e-01 79.6% 52.3%
2755815 372.2.1.2 a+b complex topology › RNase A-like › EndoU-like › EndoU-like › CoV_NSP15_C 0.72 48.0 3.34e-01 79.6% 21.5%
3221700 2484.6.1.0 mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR 0.72 54.0 3.73e-01 100.0% 25.0%
4945596 4325.1.1.0 mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.71 53.0 5.52e-01 100.0% 91.1%
4301783 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.71 46.0 4.30e-01 77.6% 55.0%
3979229 1001.1.1.1 a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 0.70 48.0 4.25e-01 79.6% 50.0%
4117250 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.70 44.0 4.25e-01 73.5% 56.4%
4660286 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.70 49.0 5.09e-01 91.8% 80.0%
4150972 2484.1.1.11 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p 0.68 58.0 4.82e-01 98.0% 67.8%
4544501 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.67 47.0 4.76e-01 100.0% 74.0%
4946414 301.13.1.0 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.67 58.0 4.37e-01 100.0% 48.8%
3381551 244.4.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit 0.67 44.0 3.62e-01 73.5% 38.8%
5082974 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.66 48.0 5.01e-01 91.8% 84.4%
4177747 809.1.1.1 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA 0.66 45.0 3.87e-01 71.4% 44.3%
4185103 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.66 43.0 4.04e-01 77.6% 55.0%
3516442 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.66 57.0 4.36e-01 100.0% 73.0%
4948090 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 55.0 3.99e-01 100.0% 34.0%
5021368 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.66 49.0 2.93e-01 79.6% 12.2%
3736612 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.65 55.0 4.67e-01 100.0% 76.5%
4981257 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.64 54.0 4.94e-01 93.9% 86.2%
5051883 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.64 52.0 5.02e-01 98.0% 81.8%
4616279 375.1.1.95 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_13 0.64 50.0 4.59e-01 87.8% 70.8%
4028871 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.64 46.0 4.03e-01 77.6% 87.7%
4050524 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.63 47.0 4.25e-01 79.6% 96.9%
4184764 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.63 47.0 4.23e-01 79.6% 98.5%
4961688 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.63 43.0 4.52e-01 93.9% 80.0%
5004341 109.2.1.0 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.62 52.0 3.00e-01 100.0% 15.5%
5033169 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.62 49.0 4.46e-01 91.8% 98.6%
4306193 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.62 47.0 4.71e-01 100.0% 84.0%
4245602 1001.1.1.1 a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 0.62 47.0 4.27e-01 81.6% 63.1%
3744344 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.61 53.0 4.06e-01 100.0% 46.1%
4341865 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.61 52.0 5.04e-01 98.0% 87.3%
3581093 4292.2.1.0 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.61 53.0 4.54e-01 100.0% 66.3%
3939443 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.61 52.0 4.08e-01 100.0% 50.0%
4039170 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.60 54.0 3.37e-01 100.0% 21.2%
3578128 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 44.0 4.32e-01 98.0% 72.7%
4937906 206.1.3.21 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK 0.60 45.0 2.97e-01 79.6% 37.8%
3931076 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.60 50.0 3.88e-01 100.0% 41.7%
3496362 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.59 49.0 3.49e-01 100.0% 33.5%
2872466 913.1.1.1 few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › HRM 0.59 40.0 3.81e-01 75.5% 59.4%
3190761 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.59 42.0 3.32e-01 77.6% 36.4%
3236050 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.58 49.0 3.88e-01 98.0% 47.3%
4002571 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.58 48.0 3.72e-01 100.0% 72.5%
3944001 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.58 47.0 4.57e-01 89.8% 90.9%
4057186 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.56 46.0 4.46e-01 93.9% 81.8%
3937730 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.54 41.0 3.95e-01 81.6% 83.6%
3595890 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.54 42.0 2.96e-01 87.8% 63.5%
3622767 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.54 45.0 3.77e-01 100.0% 54.7%
3423399 5.3.1.1 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop 0.54 45.0 3.70e-01 98.0% 93.7%
4980029 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 45.0 3.67e-01 100.0% 52.0%
4980845 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 38.0 2.52e-01 77.6% 48.7%
4992532 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 38.0 3.65e-01 83.7% 96.7%
4595466 3572.1.1.2 a+b complex topology › Cascade subunit Csa5 › Cascade subunit Csa5 › Cascade subunit Csa5 › Cas_Csa5 0.51 37.0 2.85e-01 79.6% 36.0%
3926425 220.1.1.158 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.51 42.0 3.40e-01 93.9% 67.0%
3246474 5001.1.1.44 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv 0.50 39.0 2.50e-01 93.9% 53.3%