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MN988507.1__QIG69481.1__EVB79_111__00111

Bact-Vir

MN988507.1__QIG69481.1__EVB79_111__00111

Identity

Accession:
MN988507 ↗
Kingdom:
phage

Quality

74.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-89
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 51.0 6.07e-01 91.4% 100.0%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 45.0 4.93e-01 82.7% 72.7%
3me5A01 1.10.260.140 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.69 36.0 4.04e-01 95.1% 64.1%
1uujA00 1.20.960.30 Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › 0.66 37.0 3.88e-01 75.3% 57.9%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 43.0 4.46e-01 96.3% 72.6%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 43.0 4.01e-01 79.0% 52.4%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 39.0 3.77e-01 82.7% 53.3%
6dnwA01 3.90.1750.20 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 0.64 55.0 4.80e-01 95.1% 79.7%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 38.0 3.90e-01 100.0% 64.5%
4jb3A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 47.0 4.99e-01 98.8% 94.4%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.60 46.0 4.09e-01 80.2% 63.7%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 47.0 4.85e-01 98.8% 88.5%
2f46A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.59 43.0 3.58e-01 76.5% 74.6%
2lh9A00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.59 40.0 4.13e-01 77.8% 73.1%
2np5D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 44.0 3.58e-01 81.5% 79.7%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.58 44.0 3.81e-01 81.5% 58.7%
4dccA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.57 44.0 4.59e-01 98.8% 91.9%
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.57 37.0 3.99e-01 100.0% 79.7%
4nnaA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 48.0 3.21e-01 95.1% 47.0%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 36.0 4.01e-01 98.8% 84.1%
2b0cA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 42.0 4.57e-01 98.8% 100.0%
3fdjA01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.55 41.0 3.69e-01 77.8% 89.9%
3b0pA02 1.20.120.1460 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.55 37.0 3.90e-01 72.8% 76.0%
1w98B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 42.0 3.79e-01 100.0% 59.6%
4ragA02 1.10.10.430 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphatase 2C, C-terminal domain suprefamily 0.54 40.0 4.25e-01 87.7% 95.6%
2gaiA01 3.40.50.140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 39.0 3.40e-01 77.8% 51.9%
1pbwB00 1.10.555.10 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein 0.53 41.0 3.19e-01 86.4% 73.3%
3c3dA02 1.10.8.240 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › CofD-like domain 0.53 40.0 3.91e-01 80.2% 96.6%
1u84A00 1.10.340.20 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain 0.53 46.0 4.63e-01 100.0% 98.8%
3kbbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 36.0 3.85e-01 97.5% 84.3%
1xriA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 47.0 3.80e-01 100.0% 74.2%
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.50 37.0 3.72e-01 79.0% 97.6%
1h99A01 1.10.1790.10 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain 0.50 42.0 3.94e-01 93.8% 96.2%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4014657 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 56.0 6.75e-01 81.5% 98.2%
3575777 101.43.1.0 alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.85 51.0 6.41e-01 77.8% 98.0%
3723123 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 51.0 5.84e-01 79.0% 81.7%
3629477 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 50.0 5.84e-01 79.0% 81.7%
5079851 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 49.0 5.56e-01 77.8% 78.3%
3618803 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 50.0 5.72e-01 79.0% 81.7%
3617137 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 50.0 6.03e-01 79.0% 90.9%
4929815 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 48.0 5.30e-01 77.8% 72.3%
4929599 2484.1.1.101 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 0.83 49.0 3.38e-01 80.2% 20.0%
3909922 101.1.1.12 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 0.82 48.0 5.98e-01 77.8% 96.0%
4927588 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 54.0 5.64e-01 100.0% 73.3%
3715279 101.1.1.276 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding, Myb_DNA-bind_6 0.82 51.0 3.83e-01 82.7% 28.3%
3636036 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 54.0 6.21e-01 74.1% 91.7%
3712226 101.1.1.67 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.81 50.0 4.78e-01 82.7% 53.7%
3793542 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 49.0 5.65e-01 79.0% 83.3%
5047162 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 50.0 5.55e-01 80.2% 78.5%
5027917 2484.1.1.101 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 0.81 52.0 3.61e-01 97.5% 22.1%
3609939 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.81 50.0 4.57e-01 82.7% 48.6%
5049604 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 46.0 5.43e-01 77.8% 83.6%
3720299 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 51.0 4.89e-01 100.0% 57.8%
3487537 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 49.0 5.99e-01 80.2% 100.0%
5029224 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 50.0 5.69e-01 95.1% 85.0%
4274627 101.1.1.266 alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut 0.80 50.0 5.76e-01 95.1% 86.7%
3198858 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 54.0 5.81e-01 91.4% 81.4%
5050956 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.79 46.0 3.01e-01 80.2% 14.5%
3621273 101.43.1.0 alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.79 52.0 6.22e-01 86.4% 100.0%
4926838 101.43.1.0 alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.79 51.0 5.65e-01 100.0% 83.1%
5013811 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 50.0 5.96e-01 80.2% 96.4%
3724068 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 50.0 5.82e-01 82.7% 96.4%
3684956 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.77 51.0 5.63e-01 84.0% 84.6%
3574709 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 55.0 6.27e-01 85.2% 100.0%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.76 51.0 5.47e-01 92.6% 78.9%
4014609 101.1.1.79 alpha arrays › HTH › HTH › Three-helical HTH › HTH_ABP1_N 0.75 49.0 5.37e-01 82.7% 83.1%
4958195 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 46.0 5.34e-01 81.5% 90.9%
3191996 101.1.2.480 alpha arrays › HTH › HTH › winged helix domain › Clr5 0.74 46.0 5.34e-01 82.7% 92.7%
5038787 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.74 57.0 5.18e-01 84.0% 85.5%
4979322 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.73 49.0 5.22e-01 96.3% 78.6%
3584520 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 49.0 4.39e-01 82.7% 50.9%
4013698 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 47.0 5.24e-01 100.0% 83.1%
4017273 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 46.0 5.28e-01 82.7% 94.5%
5070167 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 43.0 5.05e-01 80.2% 89.1%
3282557 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.71 59.0 4.55e-01 92.6% 84.3%
4501343 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.70 45.0 5.34e-01 75.3% 96.4%
3590291 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.70 59.0 4.82e-01 92.6% 80.7%
4392311 101.35.1.1 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 0.70 39.0 5.03e-01 75.3% 100.0%
3590551 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.69 41.0 4.93e-01 76.5% 96.0%
4939690 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.68 58.0 5.43e-01 92.6% 87.0%
3962579 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 62.0 5.12e-01 100.0% 85.7%
4971686 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 43.0 3.93e-01 82.7% 48.6%
5032641 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.68 57.0 5.17e-01 92.6% 88.2%
5052263 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 55.0 5.71e-01 100.0% 94.7%
3589089 101.1.2.489 alpha arrays › HTH › HTH › winged helix domain › Transposase_mut 0.67 54.0 4.91e-01 85.2% 75.2%
3243611 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 41.0 4.94e-01 77.8% 100.0%
3956288 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.66 57.0 4.82e-01 95.1% 80.7%
3603740 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 49.0 5.28e-01 85.2% 91.4%
3467989 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 43.0 4.85e-01 84.0% 91.7%
1145762 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.65 56.0 4.79e-01 95.1% 75.4%
3450729 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 42.0 4.46e-01 81.5% 75.7%
3228613 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 42.0 3.90e-01 84.0% 52.4%
3740014 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 49.0 5.26e-01 82.7% 95.7%
5077022 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 43.0 4.06e-01 85.2% 59.0%
3741291 592.1.1.6 alpha arrays › PWI domain-like › PWI domain › PWI domain › Nab2 0.62 48.0 4.82e-01 100.0% 83.7%
3777242 3919.1.1.2 alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.61 48.0 4.24e-01 85.2% 80.0%
4998605 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.61 51.0 4.67e-01 93.8% 90.9%
5028095 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.61 52.0 4.75e-01 92.6% 86.7%
4237263 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.61 45.0 4.02e-01 100.0% 54.2%
3001792 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.59 45.0 4.02e-01 100.0% 56.8%
4957643 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.58 50.0 3.56e-01 97.5% 35.5%
3987909 138.1.1.9 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C 0.57 49.0 4.19e-01 96.3% 60.0%
5077611 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 44.0 3.86e-01 88.9% 56.8%
3266370 2007.2.3.4 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase2 0.51 47.0 3.62e-01 100.0% 50.9%
3176966 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.51 46.0 3.11e-01 100.0% 34.7%