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MN988516.1__QIG70446.1__EVB88_062__00062
Bact-VirMN988516.1__QIG70446.1__EVB88_062__00062
Identity
- Accession:
- MN988516 ↗
- Kingdom:
- phage
Quality
91.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-167
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 35.0 | 3.74e-01 | 89.6% | 60.3% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 29.0 | 4.20e-01 | 72.6% | 97.4% |
| 4l9cA00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.61 | 36.0 | 3.75e-01 | 97.6% | 62.7% |
| 2yfoA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.58 | 45.0 | 3.66e-01 | 81.7% | 73.1% |
| 6jhpA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.58 | 45.0 | 3.69e-01 | 81.7% | 75.8% |
| 3mi6A01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.57 | 45.0 | 3.63e-01 | 81.7% | 68.9% |
| 6phxA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.57 | 44.0 | 3.58e-01 | 80.5% | 73.0% |
| 2xn1A01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.56 | 44.0 | 3.57e-01 | 81.7% | 72.9% |
| 1cb8A03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.56 | 31.0 | 3.56e-01 | 86.6% | 75.5% |
| 1d6uA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.55 | 42.0 | 3.08e-01 | 78.7% | 77.3% |
| 1lshB00 | 2.20.90.10 | Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex; beta-sheet shell regions › Vitellinogen, beta-sheet shell domain | 0.52 | 39.0 | 3.87e-01 | 76.8% | 88.5% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.52 | 45.0 | 3.51e-01 | 94.5% | 59.5% |
| 2f1vA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 36.0 | 3.49e-01 | 70.1% | 83.0% |
| 1u17A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 43.0 | 4.13e-01 | 87.8% | 90.3% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 33.0 | 3.59e-01 | 100.0% | 77.8% |
| 4orlA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 33.0 | 3.93e-01 | 74.4% | 98.2% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4008120 | 5.1.5.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1481 | 0.73 | 40.0 | 4.61e-01 | 70.7% | 72.5% |
| 3177696 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.67 | 40.0 | 3.28e-01 | 78.0% | 33.9% |
| 139039 | 12.3.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N | 0.57 | 45.0 | 3.60e-01 | 81.7% | 67.1% |
| 3968293 | 71.2.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › DUF3108 | 0.57 | 40.0 | 3.71e-01 | 71.3% | 95.7% |
| 4857362 | 12.3.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N | 0.56 | 44.0 | 3.49e-01 | 81.1% | 66.2% |
| 1148155 | 12.3.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N | 0.56 | 44.0 | 3.52e-01 | 81.7% | 70.2% |
| 4621250 | 12.3.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N | 0.56 | 44.0 | 3.51e-01 | 81.7% | 71.4% |
| 3943894 | 77.1.1.7 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › DUF1481 | 0.55 | 40.0 | 4.52e-01 | 90.9% | 98.4% |
| 3404350 | 3369.1.1.2 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › VAS1_LD | 0.54 | 41.0 | 4.23e-01 | 100.0% | 83.9% |
| 3743793 | 5.1.4.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 | 0.54 | 46.0 | 3.43e-01 | 93.9% | 72.4% |
| 3965134 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.53 | 35.0 | 4.13e-01 | 94.5% | 95.7% |
| 4188109 | 5084.5.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 | 0.52 | 39.0 | 3.08e-01 | 76.8% | 80.6% |
| 4375642 | 5084.5.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 | 0.52 | 37.0 | 2.76e-01 | 78.7% | 30.2% |
| 5038627 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.50 | 42.0 | 3.36e-01 | 89.6% | 96.0% |