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MN988517.1__QIG70548.1__EVB89_085__00085
Bact-VirMN988517.1__QIG70548.1__EVB89_085__00085
Identity
- Accession:
- MN988517 ↗
- Kingdom:
- phage
Quality
92.2
mean pLDDT
Taxonomy
TaxID: 2509750
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 178-260
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6iw2A01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.63 | 54.0 | 4.66e-01 | 97.6% | 84.2% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.58 | 42.0 | 4.55e-01 | 96.4% | 97.0% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.56 | 42.0 | 4.28e-01 | 97.6% | 81.2% |
| 5gv0A00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.56 | 43.0 | 3.54e-01 | 84.3% | 66.7% |
| 4ikcA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 38.0 | 2.64e-01 | 96.4% | 20.8% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.55 | 42.0 | 3.83e-01 | 100.0% | 59.7% |
| 3u2gA02 | 2.60.98.40 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain | 0.54 | 45.0 | 4.04e-01 | 98.8% | 86.8% |
| 3os6C00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.53 | 46.0 | 3.07e-01 | 100.0% | 65.1% |
| 2vlgC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 44.0 | 4.14e-01 | 95.2% | 100.0% |
| 3w1eA01 | 3.30.1660.40 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › FlgT, N-terminal domain | 0.53 | 43.0 | 4.27e-01 | 95.2% | 96.7% |
| 1uisA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.53 | 41.0 | 3.13e-01 | 88.0% | 94.6% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 45.0 | 3.79e-01 | 97.6% | 89.8% |
| 2pslA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.52 | 41.0 | 3.15e-01 | 89.2% | 97.2% |
| 7oocE01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.52 | 36.0 | 3.64e-01 | 90.4% | 71.8% |
| 7d58G01 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.51 | 42.0 | 4.35e-01 | 96.4% | 100.0% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.51 | 38.0 | 3.36e-01 | 97.6% | 51.5% |
| 2x9aA00 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.50 | 32.0 | 3.56e-01 | 96.4% | 86.9% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 34.0 | 3.28e-01 | 71.1% | 72.0% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4014948 | 3385.1.1.0 ↗ | beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 | 0.66 | 54.0 | 5.22e-01 | 90.4% | 98.9% |
| 3602520 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.60 | 39.0 | 4.11e-01 | 96.4% | 74.7% |
| 4377299 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.58 | 42.0 | 3.95e-01 | 100.0% | 61.0% |
| 3173192 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.57 | 38.0 | 2.61e-01 | 100.0% | 17.4% |
| 4963976 | 331.6.1.1 ↗ | a+b two layers › TBP-like › MoaD-related protein, C-terminal domain › MoaD-related protein, C-terminal domain › DUF1952 | 0.56 | 42.0 | 4.33e-01 | 98.8% | 82.5% |
| 4415843 | 880.1.1.1 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind | 0.56 | 43.0 | 2.84e-01 | 86.7% | 75.9% |
| 3995788 | 389.4.1.7 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 | 0.56 | 36.0 | 4.09e-01 | 96.4% | 91.7% |
| 4074612 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.56 | 37.0 | 3.56e-01 | 97.6% | 58.9% |
| 4030972 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.55 | 38.0 | 3.47e-01 | 97.6% | 50.8% |
| 3722829 | 9.23.1.5 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › Lipocalin_5 | 0.55 | 38.0 | 3.07e-01 | 72.3% | 80.0% |
| 5028249 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.54 | 47.0 | 4.31e-01 | 97.6% | 96.5% |
| 3781073 | 223.2.1.29 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENND11 | 0.54 | 45.0 | 3.89e-01 | 96.4% | 70.7% |
| 4498111 | 4.1.1.403 ↗ | beta barrels › SH3 › SH3 › SH3 › UPF0179 | 0.52 | 41.0 | 4.39e-01 | 91.6% | 100.0% |
| 3969448 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.52 | 40.0 | 3.72e-01 | 94.0% | 66.7% |
| 3244753 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 44.0 | 3.47e-01 | 97.6% | 48.1% |
| 5051461 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 43.0 | 3.50e-01 | 97.6% | 50.0% |
| 4944403 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 43.0 | 3.74e-01 | 97.6% | 63.0% |
D2
medium
residues 1-74
Domain cluster:
representative
D3
medium
residues 75-149_302-354
Domain cluster:
representative
D4
medium
residues 150-177_263-301
Domain cluster:
representative