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MN988519.1__QIG70595.1__EVB91_039__00024
Bact-VirMN988519.1__QIG70595.1__EVB91_039__00024
Identity
- Accession:
- MN988519 ↗
- Kingdom:
- phage
Quality
71.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-78
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jvmB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 50.0 | 4.61e-01 | 80.5% | 80.0% |
| 2cazC00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 39.0 | 4.25e-01 | 80.5% | 73.4% |
| 4h33A00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 48.0 | 4.55e-01 | 80.5% | 82.4% |
| 7vwtA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.62 | 53.0 | 3.60e-01 | 100.0% | 27.9% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 52.0 | 4.23e-01 | 94.8% | 95.3% |
| 1udyA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.61 | 46.0 | 4.08e-01 | 83.1% | 68.3% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.59 | 49.0 | 3.93e-01 | 90.9% | 85.1% |
| 3vw4A01 | 1.10.340.50 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.58 | 40.0 | 3.78e-01 | 71.4% | 83.7% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.58 | 41.0 | 3.90e-01 | 75.3% | 87.2% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 43.0 | 4.30e-01 | 83.1% | 93.9% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.58 | 43.0 | 4.61e-01 | 100.0% | 98.4% |
| 3pivA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.57 | 48.0 | 3.99e-01 | 100.0% | 81.4% |
| 1w36B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 43.0 | 3.06e-01 | 81.8% | 89.9% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 42.0 | 3.69e-01 | 80.5% | 65.0% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.56 | 41.0 | 4.15e-01 | 80.5% | 77.3% |
| 2qksA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 42.0 | 3.84e-01 | 80.5% | 85.8% |
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 42.0 | 3.73e-01 | 80.5% | 86.6% |
| 3vouB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 42.0 | 3.51e-01 | 80.5% | 53.7% |
| 4etrB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 46.0 | 3.97e-01 | 92.2% | 82.0% |
| 3u3iA02 | 1.20.58.1110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 39.0 | 3.54e-01 | 96.1% | 54.6% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 45.0 | 3.53e-01 | 94.8% | 96.5% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.54 | 40.0 | 3.84e-01 | 80.5% | 67.8% |
| 2gxaE01 | 1.10.10.510 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain | 0.54 | 39.0 | 4.04e-01 | 96.1% | 82.2% |
| 6wk3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 39.0 | 3.31e-01 | 100.0% | 42.8% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 44.0 | 3.62e-01 | 93.5% | 98.0% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 46.0 | 3.33e-01 | 96.1% | 44.1% |
| 6d5xA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.53 | 43.0 | 3.52e-01 | 90.9% | 80.8% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.53 | 41.0 | 3.42e-01 | 84.4% | 47.4% |
| 2qywA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.53 | 44.0 | 4.10e-01 | 90.9% | 81.1% |
| 1oxjA02 | 1.25.40.170 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Smaug, PHAT domain | 0.53 | 43.0 | 3.89e-01 | 100.0% | 65.1% |
| 1k74D00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.52 | 39.0 | 2.79e-01 | 83.1% | 32.0% |
| 3gzfD00 | 1.10.150.420 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Coronavirus nonstructural protein 4 C-terminus | 0.51 | 36.0 | 3.48e-01 | 81.8% | 62.6% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 44.0 | 3.82e-01 | 96.1% | 81.7% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.50 | 44.0 | 3.83e-01 | 97.4% | 79.2% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 38.0 | 3.21e-01 | 98.7% | 46.4% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4407662 | 6028.1.1.1 ↗ | alpha bundles › Ribosome modulation factor › Ribosome modulation factor › Ribosome modulation factor › RMF | 0.79 | 59.0 | 6.63e-01 | 77.9% | 100.0% |
| 4583566 | 141.1.1.2 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › SQS_PSY | 0.68 | 60.0 | 4.20e-01 | 100.0% | 34.9% |
| 4874207 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.66 | 50.0 | 4.74e-01 | 80.5% | 92.3% |
| 3920362 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.66 | 50.0 | 3.28e-01 | 80.5% | 31.6% |
| 3056394 | 1176.1.1.1 ↗ | alpha arrays › Nitrogenase vanadium-iron protein delta chain › Nitrogenase vanadium-iron protein delta chain › Nitrogenase vanadium-iron protein delta chain › AnfG_VnfG | 0.64 | 55.0 | 4.86e-01 | 98.7% | 78.2% |
| 2168246 | 1176.1.1.1 ↗ | alpha arrays › Nitrogenase vanadium-iron protein delta chain › Nitrogenase vanadium-iron protein delta chain › Nitrogenase vanadium-iron protein delta chain › AnfG_VnfG | 0.64 | 54.0 | 4.89e-01 | 98.7% | 82.3% |
| 3435460 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.64 | 48.0 | 3.67e-01 | 80.5% | 34.4% |
| 3793454 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.62 | 47.0 | 3.61e-01 | 80.5% | 74.3% |
| 4020549 | 197.1.1.3 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › ACBP | 0.62 | 47.0 | 4.32e-01 | 84.4% | 63.0% |
| 3619183 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.62 | 47.0 | 3.74e-01 | 80.5% | 76.0% |
| 3928936 | 197.1.1.3 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › ACBP | 0.62 | 46.0 | 4.06e-01 | 83.1% | 53.9% |
| 4962781 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.61 | 39.0 | 4.00e-01 | 84.4% | 66.7% |
| 3184080 | 109.4.1.1940 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, TPR_CAND1, PF28359 | 0.61 | 45.0 | 2.45e-01 | 96.1% | 4.5% |
| 4976283 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.61 | 45.0 | 4.04e-01 | 80.5% | 63.5% |
| 4163021 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.60 | 45.0 | 4.19e-01 | 80.5% | 73.0% |
| 3399406 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.60 | 45.0 | 3.30e-01 | 80.5% | 91.4% |
| 4596030 | 5086.1.1.218 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › MSP1_C | 0.60 | 44.0 | 4.03e-01 | 81.8% | 73.6% |
| 3221599 | 5001.1.1.27 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Sre | 0.59 | 43.0 | 2.80e-01 | 76.6% | 43.4% |
| 3412831 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.58 | 43.0 | 3.46e-01 | 77.9% | 86.7% |
| 3388147 | 7014.1.1.2 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE | 0.57 | 42.0 | 3.92e-01 | 79.2% | 88.0% |
| 4874340 | 5054.1.1.1 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan | 0.57 | 43.0 | 3.81e-01 | 80.5% | 68.5% |
| 3471396 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.57 | 39.0 | 3.67e-01 | 84.4% | 57.9% |
| 4162329 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.57 | 44.0 | 3.18e-01 | 81.8% | 87.4% |
| 3399198 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.57 | 43.0 | 3.47e-01 | 80.5% | 56.1% |
| 3701148 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.57 | 50.0 | 3.37e-01 | 100.0% | 28.3% |
| 3990854 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.56 | 41.0 | 3.88e-01 | 80.5% | 64.4% |
| 3232602 | 197.1.1.3 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › ACBP | 0.56 | 41.0 | 3.98e-01 | 79.2% | 72.2% |
| 3564428 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.56 | 42.0 | 2.82e-01 | 79.2% | 25.5% |
| 3718646 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.56 | 49.0 | 3.42e-01 | 100.0% | 73.0% |
| 3394199 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.55 | 45.0 | 3.80e-01 | 92.2% | 78.6% |
| 4397604 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.55 | 49.0 | 4.15e-01 | 100.0% | 67.7% |
| 3297770 | 622.4.1.26 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA | 0.55 | 42.0 | 4.10e-01 | 81.8% | 78.8% |
| 4987757 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.54 | 39.0 | 3.59e-01 | 77.9% | 66.3% |
| 4444553 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.54 | 39.0 | 2.56e-01 | 80.5% | 18.2% |
| 4789617 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.53 | 41.0 | 3.86e-01 | 83.1% | 81.9% |
| 5013534 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.53 | 46.0 | 3.67e-01 | 97.4% | 47.7% |
| 4974404 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.53 | 43.0 | 3.74e-01 | 88.3% | 83.3% |
| 3408207 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.53 | 44.0 | 3.64e-01 | 92.2% | 77.1% |
| 4226297 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.53 | 42.0 | 3.64e-01 | 88.3% | 75.2% |
| 5012473 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.53 | 40.0 | 3.55e-01 | 80.5% | 94.5% |
| 3407357 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.53 | 45.0 | 3.66e-01 | 100.0% | 83.1% |
| 3619575 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.53 | 40.0 | 3.97e-01 | 80.5% | 77.5% |
| 3413653 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.52 | 43.0 | 3.69e-01 | 92.2% | 81.5% |
| 4174467 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.52 | 40.0 | 3.78e-01 | 80.5% | 74.4% |
| 3398718 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.52 | 45.0 | 3.80e-01 | 100.0% | 87.1% |
| 3857450 | 5054.1.1.1 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Lig_chan | 0.52 | 45.0 | 3.62e-01 | 97.4% | 83.2% |
| 3952598 | 150.7.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE | 0.51 | 39.0 | 3.68e-01 | 80.5% | 68.9% |
| 3400182 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.51 | 45.0 | 3.87e-01 | 100.0% | 85.6% |
| 3411007 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.50 | 43.0 | 3.65e-01 | 96.1% | 85.4% |