←Back to structures
MN988519.1__QIG70596.1__EVB91_040__00025
Bact-VirMN988519.1__QIG70596.1__EVB91_040__00025
Identity
- Accession:
- MN988519 ↗
- Kingdom:
- phage
Quality
72.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 470-634
Domain cluster:
rep: OQ594355.1__WEV89314.1__H10PHJ05_13__00013__D4-203
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lbuA02 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.74 | 57.0 | 6.40e-01 | 84.8% | 100.0% |
| 3rc2A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 30.0 | 2.85e-01 | 97.6% | 44.2% |
| 2mqdA00 | 3.30.1460.60 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 29.0 | 3.37e-01 | 93.3% | 71.4% |
| 3ll7A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 42.0 | 4.06e-01 | 87.3% | 90.5% |
| 3citA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 29.0 | 3.04e-01 | 75.8% | 58.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5588 | 307.1.1.5 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Peptidase_M15_3 | 0.74 | 57.0 | 6.41e-01 | 85.5% | 100.0% |
| 5013605 | 304.165.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 | 0.66 | 35.0 | 3.76e-01 | 75.8% | 57.9% |
| 3831436 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.60 | 27.0 | 3.69e-01 | 73.3% | 83.7% |
| 3463023 | 4987.1.1.0 ↗ | few secondary structure elements › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal protein L31p | 0.56 | 15.0 | 3.04e-01 | 90.3% | 92.5% |
| 3938460 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.56 | 44.0 | 3.87e-01 | 83.6% | 78.8% |
| 146894 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.55 | 43.0 | 3.98e-01 | 81.2% | 84.0% |
| 4649282 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.53 | 43.0 | 3.71e-01 | 85.5% | 76.5% |
| 3743748 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 25.0 | 3.33e-01 | 70.3% | 82.2% |