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MN988519.1__QIG70629.1__EVB91_073__00058

Bact-Vir

MN988519.1__QIG70629.1__EVB91_073__00058

Identity

Accession:
MN988519 ↗
Kingdom:
phage

Quality

86.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 340-416
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11753.14 best DUF3310 25.0 2.40e-05 80.5% 95.0%
D2 medium residues 1-87_238-268
PDB
Domain cluster: representative
CATH (69)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c5cB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 51.0 4.48e-01 73.7% 85.0%
3regA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 50.0 4.37e-01 73.7% 83.6%
5h7kA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 49.0 3.88e-01 73.7% 69.0%
1d5cA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 49.0 4.38e-01 73.7% 56.2%
3g8rA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 48.0 3.75e-01 73.7% 34.0%
3looB01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.66 47.0 3.55e-01 73.7% 55.0%
4ldaB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 47.0 4.63e-01 73.7% 79.5%
6cblD01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.65 47.0 3.79e-01 73.7% 49.3%
2q09A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.65 46.0 3.44e-01 72.9% 39.1%
6w6aA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 49.0 3.81e-01 79.7% 94.0%
2b4yA01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.64 46.0 4.20e-01 73.7% 82.9%
7s2iA01 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.64 45.0 3.49e-01 73.7% 49.8%
3s83A00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.64 45.0 3.48e-01 73.7% 55.9%
1tqxA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 45.0 3.66e-01 91.5% 39.4%
1eiwA00 3.40.50.9200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein MTH538 0.63 45.0 4.65e-01 73.7% 81.1%
1ur4A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 56.0 3.95e-01 100.0% 88.6%
4xk2B00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.62 51.0 3.79e-01 89.0% 91.6%
1reqB01 3.20.20.240 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Methylmalonyl-CoA mutase 0.62 53.0 3.63e-01 94.1% 67.7%
3erpA01 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.62 54.0 4.02e-01 94.9% 88.3%
4tv5A00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.62 47.0 3.73e-01 80.5% 90.6%
4emyA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.62 44.0 3.51e-01 73.7% 55.9%
4jcmA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 53.0 3.77e-01 95.8% 91.7%
3qz6A00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.62 47.0 3.63e-01 80.5% 90.3%
8sl7B01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.62 44.0 3.40e-01 73.7% 60.9%
3kloA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 44.0 4.12e-01 73.7% 72.2%
3hdvB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 43.0 4.29e-01 73.7% 80.2%
3dzvA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.61 43.0 3.35e-01 73.7% 40.5%
5c54G00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 54.0 4.03e-01 100.0% 90.6%
6m4eA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 54.0 3.52e-01 100.0% 85.3%
4cqbA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.60 47.0 3.56e-01 84.7% 90.7%
1k70A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.60 47.0 3.53e-01 84.7% 91.2%
2v4uA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.60 43.0 3.27e-01 73.7% 86.1%
2pmqA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.60 47.0 3.81e-01 85.6% 87.6%
1tg7A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.59 52.0 3.81e-01 100.0% 87.3%
1f6kC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 50.0 3.80e-01 93.2% 78.9%
8hi7B01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.59 52.0 3.98e-01 99.2% 92.9%
3n2xA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 49.0 3.70e-01 92.4% 69.1%
1reqB02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.58 42.0 3.96e-01 73.7% 77.0%
1n0uA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 50.0 4.14e-01 93.2% 82.4%
3otxB01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.58 49.0 3.65e-01 89.8% 96.8%
7dz9A01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.58 49.0 3.85e-01 94.1% 92.6%
1nf7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 51.0 3.42e-01 97.5% 41.0%
2hx1A02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 41.0 4.12e-01 73.7% 89.3%
1eepA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 48.0 3.49e-01 89.8% 53.8%
5xgbA03 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.57 46.0 3.59e-01 85.6% 62.2%
3hv8A00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.57 46.0 3.63e-01 85.6% 63.2%
3mw8A01 3.40.50.10090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 40.0 4.10e-01 73.7% 88.0%
1yx1A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.57 48.0 3.73e-01 90.7% 79.2%
4jejA00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.57 45.0 3.60e-01 85.6% 79.7%
3nzpB02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.57 47.0 3.61e-01 89.0% 64.4%
1zfjA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 51.0 3.38e-01 100.0% 37.6%
3nyqA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.56 40.0 2.82e-01 73.7% 28.6%
3vasA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 48.0 3.57e-01 91.5% 96.8%
3bwwA01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.56 49.0 3.79e-01 94.9% 86.6%
3bc9A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.56 47.0 3.54e-01 92.4% 80.6%
4d8lA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.55 47.0 3.52e-01 92.4% 45.6%
3t7vA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 45.0 3.26e-01 88.1% 76.3%
1y65A00 3.20.20.300 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain 0.55 50.0 3.61e-01 100.0% 91.2%
2ybdA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.55 45.0 4.24e-01 87.3% 84.7%
3ktnA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.55 47.0 3.33e-01 91.5% 92.4%
3qfeB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 44.0 3.35e-01 89.0% 82.8%
4ml9A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 49.0 3.74e-01 100.0% 85.5%
2iw3A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 39.0 3.16e-01 73.7% 58.0%
1dl3B00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 48.0 4.10e-01 100.0% 92.3%
1xv5A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 37.0 3.11e-01 73.7% 72.9%
1e43A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 43.0 3.25e-01 89.0% 60.3%
2x4gA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 44.0 3.28e-01 94.1% 55.6%
2kg4A00 3.30.1330.30 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 0.51 39.0 3.53e-01 96.6% 58.8%
2oq2D00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 45.0 3.57e-01 100.0% 78.0%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4972142 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.74 53.0 4.21e-01 73.7% 59.1%
5058430 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.73 52.0 3.73e-01 73.7% 42.2%
4975940 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.72 51.0 4.45e-01 73.7% 67.8%
5067884 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.72 51.0 3.67e-01 73.7% 40.0%
4031792 2004.1.1.36 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N 0.71 50.0 4.02e-01 73.7% 81.7%
5052277 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.71 51.0 3.59e-01 73.7% 39.4%
3654480 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.69 49.0 3.61e-01 73.7% 42.5%
5048593 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.69 49.0 4.46e-01 73.7% 59.1%
4944822 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.69 49.0 3.94e-01 73.7% 57.8%
3253418 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.68 49.0 3.98e-01 73.7% 67.1%
4927930 2007.3.1.3 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig 0.68 49.0 3.66e-01 73.7% 44.7%
3178899 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.68 48.0 3.38e-01 72.9% 60.6%
3719129 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.67 55.0 3.74e-01 89.8% 91.6%
5073128 2002.1.1.75 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › QRPTase_C 0.67 42.0 3.68e-01 73.7% 41.7%
3800228 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.67 48.0 3.34e-01 73.7% 61.7%
4945925 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.67 61.0 4.25e-01 100.0% 72.8%
5006460 2007.3.1.3 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig 0.67 47.0 4.24e-01 73.7% 76.4%
3614992 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.66 55.0 3.79e-01 89.8% 90.7%
3550262 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.66 47.0 3.34e-01 73.7% 62.3%
4952359 2007.10.1.0 a/b three-layered sandwiches › Flavodoxin-like › Hypothetical protein MTH538 › Hypothetical protein MTH538 0.66 47.0 4.71e-01 72.9% 85.8%
4928481 2007.3.1.3 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig 0.66 47.0 3.28e-01 73.7% 31.4%
4643263 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.66 61.0 4.30e-01 100.0% 74.8%
1087540 2007.1.3.9 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › TadZ_N 0.66 47.0 4.62e-01 73.7% 78.9%
4970052 2007.3.1.3 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig 0.66 47.0 4.13e-01 73.7% 71.4%
3948076 2007.3.1.3 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig 0.66 47.0 4.15e-01 73.7% 71.2%
3240979 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.66 47.0 4.20e-01 73.7% 75.8%
5006605 2002.1.1.36 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind 0.66 47.0 3.62e-01 73.7% 36.5%
4980310 2007.3.1.0 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.66 47.0 4.18e-01 73.7% 75.8%
3698490 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.66 50.0 3.65e-01 79.7% 85.5%
4015619 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 56.0 4.23e-01 93.2% 96.5%
3595054 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 46.0 3.24e-01 73.7% 27.2%
4207347 2002.1.1.43 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth 0.65 46.0 3.66e-01 73.7% 51.2%
5000492 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.65 59.0 4.10e-01 100.0% 71.3%
3282809 2002.1.1.218 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › C-C_Bond_Lyase 0.64 46.0 3.20e-01 73.7% 34.6%
5030930 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.64 45.0 3.25e-01 73.7% 58.3%
4063737 2003.1.4.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 0.63 45.0 3.50e-01 73.7% 88.6%
3279986 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.63 45.0 3.46e-01 73.7% 44.6%
5073746 2003.1.1.368 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Molybdopterin 0.62 44.0 4.18e-01 73.7% 90.7%
4983768 2003.1.1.50 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF364 0.62 44.0 4.11e-01 73.7% 73.1%
142707 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.62 47.0 3.63e-01 80.5% 90.3%
5057587 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.61 50.0 3.63e-01 89.0% 60.3%
4962858 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.61 43.0 4.29e-01 73.7% 77.6%
3804697 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.61 43.0 3.58e-01 73.7% 58.1%
4030884 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.60 46.0 3.60e-01 81.4% 89.9%
5005142 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.60 43.0 3.37e-01 73.7% 42.4%
5009560 2002.1.1.134 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.60 42.0 3.52e-01 73.7% 41.1%
4076512 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.59 42.0 4.17e-01 73.7% 79.2%
5057046 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.59 49.0 3.76e-01 90.7% 85.0%
5074084 2002.1.1.56 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.59 47.0 3.65e-01 85.6% 82.4%
3645264 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.58 42.0 3.92e-01 73.7% 76.6%
3996293 2007.15.1.4 a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyri_tr2 0.58 41.0 3.54e-01 72.9% 67.6%
4480516 2007.1.3.41 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PF30372 0.58 41.0 3.88e-01 73.7% 72.4%
3654307 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.58 46.0 3.82e-01 85.6% 71.2%
3909866 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.58 50.0 3.82e-01 94.1% 91.9%
4487278 2002.1.1.66 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I 0.58 49.0 3.99e-01 91.5% 67.7%
5044225 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.58 41.0 3.60e-01 73.7% 64.4%
4995173 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.58 48.0 3.57e-01 91.5% 64.1%
3288861 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.57 41.0 3.59e-01 73.7% 69.8%
1140436 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.57 49.0 3.44e-01 91.5% 95.9%
2834370 2002.1.1.136 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF692 0.57 49.0 3.81e-01 94.9% 92.0%
5042340 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.57 49.0 3.90e-01 94.9% 92.5%
3829758 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.56 40.0 3.45e-01 73.7% 53.0%
4130482 2002.1.1.36 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind 0.56 47.0 3.59e-01 90.7% 82.9%
3594637 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.56 40.0 3.07e-01 73.7% 40.0%
3263684 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.56 40.0 3.03e-01 73.7% 40.7%
153749 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.56 48.0 3.38e-01 91.5% 97.4%
3594665 2003.6.1.0 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like 0.56 48.0 3.39e-01 91.5% 96.2%
4079508 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.56 48.0 3.33e-01 94.1% 62.4%
2062771 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.55 39.0 3.85e-01 73.7% 91.3%
4946844 7583.1.1.1 a/b three-layered sandwiches › Rossmann-like domain in AF1104-like proteins › Rossmann-like domain in AF1104-like proteins › Rossmann-like domain in AF1104-like proteins › ARMT1-like_dom 0.55 47.0 3.93e-01 94.9% 83.8%
1103034 2002.1.1.43 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth 0.54 49.0 3.74e-01 100.0% 85.5%
4487126 2002.1.1.161 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_97 0.54 45.0 3.57e-01 94.1% 84.2%
3797404 2007.15.1.0 a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase 0.53 42.0 3.75e-01 83.9% 92.7%
4485059 2002.1.1.10 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS 0.52 45.0 3.52e-01 94.1% 73.8%
3685663 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.52 45.0 3.33e-01 94.9% 70.8%
D3 medium residues 133-237_269-306
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ik4A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.72 47.0 3.92e-01 93.0% 38.6%
2ze3A01 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.70 55.0 4.66e-01 97.2% 51.3%
1wx0A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 44.0 3.88e-01 95.1% 43.1%
1tkkA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.69 47.0 3.90e-01 93.0% 40.2%
2yr1A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 47.0 3.89e-01 95.8% 40.9%
1jcjA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 47.0 3.84e-01 93.0% 41.3%
2h9aA01 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.65 47.0 3.83e-01 97.9% 40.9%
4dghA00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.62 41.0 4.31e-01 87.4% 74.2%
1avaA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 52.0 3.97e-01 93.7% 54.5%
3eqzB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 41.0 4.39e-01 88.1% 79.2%
7wj9A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 53.0 4.16e-01 97.2% 54.2%
3rptA00 3.20.20.40 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase 0.60 42.0 3.51e-01 95.8% 40.7%
3r89A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 45.0 3.57e-01 93.0% 39.4%
1eepA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 52.0 4.03e-01 98.6% 44.6%
1d5wA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 39.0 4.20e-01 86.7% 79.7%
4qrnB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 50.0 3.73e-01 93.0% 50.0%
4m37A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 32.0 3.21e-01 72.7% 51.0%
5xgbA03 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.57 48.0 4.04e-01 93.0% 55.4%
5xb6A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 49.0 4.28e-01 94.4% 81.4%
1k04A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.56 32.0 3.75e-01 90.9% 77.9%
2bdtA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 44.0 4.15e-01 83.2% 86.0%
1gc5A01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 45.0 3.36e-01 93.0% 35.3%
4gp6A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 45.0 4.31e-01 90.2% 84.8%
3nwoA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 49.0 3.86e-01 100.0% 99.3%
1zccA00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.54 46.0 3.86e-01 92.3% 55.0%
5w8oA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 45.0 3.48e-01 93.0% 89.4%
1rqlA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 42.0 3.89e-01 84.6% 91.0%
4bluB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 44.0 3.57e-01 91.6% 68.8%
2p4gA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.52 42.0 3.54e-01 88.1% 58.9%
8j50A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 46.0 3.59e-01 100.0% 48.3%
2oo3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 44.0 3.61e-01 93.7% 80.1%
5g0aA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.51 44.0 3.58e-01 96.5% 63.7%
2l82A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 43.0 4.15e-01 91.6% 82.7%
1y1pA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 45.0 3.49e-01 99.3% 56.9%
2hx1A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.50 40.0 3.87e-01 84.6% 87.7%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4931554 2002.1.1.134 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.69 48.0 4.01e-01 94.4% 43.0%
2723561 2002.1.1.76 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC 0.68 54.0 4.25e-01 99.3% 40.4%
5025353 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.64 46.0 4.03e-01 88.1% 49.3%
3483340 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.63 57.0 4.20e-01 100.0% 38.1%
5012913 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.63 53.0 4.67e-01 88.8% 79.4%
3470075 2002.1.1.114 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_85 0.63 57.0 4.22e-01 100.0% 38.6%
4017361 2002.1.1.119 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › CutC 0.62 52.0 4.11e-01 93.0% 61.2%
3964620 2002.1.1.108 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › NMO 0.61 47.0 3.49e-01 97.9% 31.1%
142890 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.59 45.0 3.57e-01 93.0% 39.4%
3640245 109.58.1.1 alpha superhelices › Repetitive alpha hairpins › DNA repair protein Rev1 C-terminal domain › DNA repair protein Rev1 C-terminal domain › REV1_C 0.58 42.0 4.43e-01 74.1% 89.2%
3595829 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.55 48.0 4.44e-01 100.0% 74.4%
3222768 2006.1.6.4 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N 0.55 45.0 4.07e-01 88.8% 94.0%
3720196 207.1.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 0.55 45.0 4.56e-01 100.0% 87.6%
3599947 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.54 36.0 3.88e-01 88.1% 78.3%
3288511 7579.1.1.44 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 0.53 48.0 3.97e-01 100.0% 93.2%
3607730 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.53 48.0 4.50e-01 100.0% 93.7%
5072653 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.52 44.0 4.04e-01 92.3% 84.6%
3498620 207.1.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 0.52 47.0 3.97e-01 100.0% 76.7%
3612793 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.52 42.0 4.18e-01 86.7% 84.1%
5026030 2002.1.1.45 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_31_2nd 0.52 46.0 3.53e-01 99.3% 56.5%
3587705 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.51 38.0 3.92e-01 97.2% 80.7%
4432476 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.51 43.0 3.44e-01 92.3% 92.0%