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MN988526.1__QIG72961.1__EVB98_039__00039

Bact-Vir

MN988526.1__QIG72961.1__EVB98_039__00039

Identity

Accession:
MN988526 ↗
Kingdom:
phage

Quality

81.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 28-84
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fzsA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.85 62.0 4.10e-01 94.7% 21.1%
2p4vA01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.82 69.0 6.19e-01 94.7% 67.1%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 69.0 6.37e-01 94.7% 95.8%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.77 66.0 5.89e-01 91.2% 73.7%
1vq8V00 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 68.0 6.48e-01 96.5% 83.1%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.76 72.0 5.98e-01 100.0% 70.3%
1y6xA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.76 65.0 5.61e-01 98.2% 60.9%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 67.0 5.27e-01 94.7% 84.4%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 66.0 6.07e-01 94.7% 79.5%
4kzsA02 6.10.140.1870 Special › Helix non-globular › Helix Hairpins › 0.75 67.0 6.23e-01 100.0% 80.0%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.74 69.0 5.34e-01 100.0% 67.5%
4gltA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.73 67.0 5.23e-01 100.0% 83.3%
2yv9B02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.72 64.0 4.85e-01 100.0% 76.9%
3u5nA02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.72 64.0 5.03e-01 100.0% 93.3%
4fppB01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.71 63.0 5.81e-01 94.7% 83.1%
4id0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.71 65.0 5.11e-01 100.0% 83.0%
3t8vA05 1.25.50.10 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain 0.71 63.0 3.89e-01 100.0% 16.8%
1b04A03 1.10.287.610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.71 61.0 5.94e-01 100.0% 87.1%
3l1nA01 6.10.140.790 Special › Helix non-globular › Helix Hairpins › 0.71 56.0 5.86e-01 93.0% 96.1%
1rv2D04 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.71 61.0 5.73e-01 94.7% 87.1%
1d0xA04 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.70 60.0 4.57e-01 98.2% 88.3%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.69 59.0 5.59e-01 93.0% 94.1%
5fhiA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.69 62.0 4.62e-01 100.0% 68.3%
2qywA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.68 61.0 5.10e-01 100.0% 75.8%
4ie5A02 1.20.58.1470 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FTO C-terminal domain 0.67 59.0 4.51e-01 100.0% 61.9%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 55.0 4.57e-01 94.7% 92.5%
7wz5A01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.67 57.0 4.23e-01 96.5% 67.5%
1ni3A03 1.10.150.300 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain 0.67 52.0 4.57e-01 93.0% 56.0%
2r9rH02 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.66 58.0 4.29e-01 100.0% 80.3%
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 54.0 4.90e-01 94.7% 70.0%
7febA03 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.64 48.0 4.26e-01 93.0% 54.3%
1gy8D02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 56.0 3.69e-01 100.0% 41.3%
7r0kA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.62 46.0 3.24e-01 84.2% 27.1%
3lphC00 6.10.140.630 Special › Helix non-globular › Helix Hairpins › 0.61 47.0 4.75e-01 94.7% 82.8%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.61 46.0 4.76e-01 82.5% 100.0%
1pn9B02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.60 50.0 3.97e-01 100.0% 53.1%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.60 44.0 4.47e-01 77.2% 78.9%
3bg2A03 1.10.3410.10 Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain 0.60 47.0 4.00e-01 94.7% 52.1%
7oq4Z01 1.20.120.950 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 0.59 51.0 4.30e-01 98.2% 58.2%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.59 51.0 4.29e-01 100.0% 78.8%
1db3A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 52.0 3.49e-01 100.0% 40.2%
1uajA02 1.10.1270.20 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2 0.58 39.0 3.63e-01 100.0% 53.4%
4l80D00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.58 51.0 3.14e-01 100.0% 18.9%
2p1zB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 44.0 3.31e-01 89.5% 95.2%
4errB00 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 45.0 4.09e-01 96.5% 62.7%
4aidA02 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.57 47.0 4.27e-01 98.2% 72.0%
3vpsB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 51.0 3.47e-01 100.0% 39.6%
3r4iA02 6.10.140.960 Special › Helix non-globular › Helix Hairpins › 0.56 45.0 4.51e-01 94.7% 86.7%
1xjuA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.56 44.0 3.26e-01 87.7% 97.4%
4g7xB00 3.30.1150.10 Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › 0.55 49.0 4.03e-01 100.0% 90.2%
6r8gB02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.54 44.0 3.11e-01 89.5% 33.5%
3sigA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.53 46.0 2.97e-01 96.5% 62.3%
1ze0A02 1.10.4070.10 Mainly Alpha › Orthogonal Bundle › putative redox-enzyme maturation protein fold › putative redox-enzyme maturation protein domain 0.53 40.0 3.69e-01 86.0% 100.0%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3227967 616.1.1.2 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › WHEP-TRS 0.87 72.0 7.15e-01 100.0% 85.0%
3916642 192.2.1.56 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › KIF9 0.82 71.0 5.13e-01 94.7% 40.7%
4176207 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 70.0 5.08e-01 94.7% 38.7%
4014175 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.80 70.0 5.52e-01 96.5% 49.1%
3167929 192.4.1.0 alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) 0.78 67.0 6.22e-01 96.5% 75.7%
3595119 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.78 67.0 4.07e-01 94.7% 15.9%
3402318 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.78 70.0 5.85e-01 98.2% 68.4%
3774116 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.77 70.0 5.53e-01 98.2% 59.1%
3614763 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.76 70.0 5.39e-01 100.0% 89.2%
4996191 159.1.2.2 alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › MazG 0.76 70.0 5.48e-01 98.2% 58.7%
5062471 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.75 65.0 5.16e-01 94.7% 97.3%
3792152 192.4.1.0 alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) 0.75 66.0 5.02e-01 98.2% 50.8%
3787269 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.75 67.0 5.32e-01 98.2% 98.2%
3517171 604.8.1.3 alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo › Gpi1 0.74 63.0 4.25e-01 94.7% 53.8%
4346887 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.74 64.0 5.82e-01 94.7% 72.0%
3394655 603.1.1.104 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 0.74 65.0 3.94e-01 94.7% 51.5%
3721737 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.74 67.0 5.00e-01 100.0% 67.4%
3507024 5059.1.1.1 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.72 60.0 3.78e-01 93.0% 57.7%
3283935 633.6.1.0 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like 0.70 60.0 4.36e-01 98.2% 63.0%
3416265 603.1.1.104 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 0.70 61.0 3.67e-01 98.2% 41.5%
3418785 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.69 61.0 4.16e-01 100.0% 47.8%
3410018 603.1.1.104 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 0.69 59.0 3.62e-01 98.2% 54.7%
3924145 3691.1.1.1 alpha arrays › Phosphomannose isomerase helical insertion domain › Phosphomannose isomerase helical insertion domain › Phosphomannose isomerase helical insertion domain › PMI_typeI_hel 0.68 56.0 4.37e-01 91.2% 44.3%
3398015 603.1.1.104 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 0.67 59.0 3.59e-01 100.0% 59.8%
3839126 5069.1.1.2 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Ni_hydr_CYTB 0.67 61.0 4.17e-01 100.0% 50.8%
4955523 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.67 54.0 4.23e-01 87.7% 44.3%
3187391 5076.1.1.0 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier 0.67 56.0 3.69e-01 94.7% 31.8%
3736821 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.66 59.0 4.21e-01 100.0% 61.2%
3641227 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.66 46.0 4.21e-01 71.9% 54.7%
3183367 109.4.1.356 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.66 57.0 3.69e-01 100.0% 21.5%
3277618 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.66 54.0 5.02e-01 94.7% 73.3%
3408042 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.66 58.0 3.49e-01 100.0% 33.6%
3903618 219.1.1.54 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C98 0.66 57.0 3.62e-01 98.2% 66.9%
2709394 4033.1.1.0 alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like 0.65 56.0 4.10e-01 100.0% 48.1%
4114078 633.6.1.3 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › HpaB 0.64 53.0 3.73e-01 98.2% 53.5%
4019732 603.1.1.99 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 0.63 54.0 4.22e-01 100.0% 63.1%
3968504 632.7.1.4 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › MgtC 0.63 47.0 3.67e-01 84.2% 36.2%
3212403 3877.1.1.1 alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP 0.63 53.0 3.52e-01 100.0% 56.9%
2630137 4033.1.1.1 alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N 0.63 52.0 3.93e-01 100.0% 47.8%
4613874 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 52.0 3.16e-01 100.0% 18.9%
3326206 610.2.1.1 alpha arrays › ERP29 C domain-like › Helical domain of Sec23/24 › Helical domain of Sec23/24 › Sec23_helical 0.62 48.0 4.11e-01 89.5% 69.0%
4588382 109.4.1.1297 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570 0.61 53.0 3.04e-01 100.0% 9.6%
5070087 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.60 50.0 4.41e-01 93.0% 64.7%
3308691 109.4.1.736 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PHD 0.60 50.0 2.88e-01 100.0% 9.9%
3669948 109.4.1.1495 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26522 0.59 50.0 2.86e-01 100.0% 9.5%
4963809 5065.1.1.3 alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.59 51.0 3.26e-01 100.0% 30.7%
3482601 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.59 48.0 3.49e-01 98.2% 48.3%
3391391 4177.1.1.16 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FAP206 0.58 48.0 3.10e-01 98.2% 49.7%
3846225 109.4.1.1387 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dymeclin, Hid1 0.58 49.0 3.08e-01 100.0% 16.7%
3782437 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.58 47.0 4.01e-01 93.0% 74.0%
3946654 517.2.1.0 beta barrels › CBF-like › TraF › TraF 0.58 45.0 3.02e-01 96.5% 19.3%
4328339 101.1.10.33 alpha arrays › HTH › HTH › Cyclin-like › Rrn7_cyclin_C 0.57 43.0 3.07e-01 82.5% 71.4%
3600359 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 46.0 3.09e-01 100.0% 27.2%
3201554 150.1.1.98 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Vwaint 0.56 47.0 3.81e-01 100.0% 52.5%
3939318 109.4.1.17 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin 0.56 50.0 3.03e-01 100.0% 23.5%
3630540 3877.1.1.0 alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.53 46.0 2.97e-01 98.2% 50.9%
4857394 5054.1.1.6 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.53 42.0 3.41e-01 94.7% 69.4%
4927967 2003.1.2.297 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_dim 0.51 45.0 2.66e-01 96.5% 21.9%