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MN988526.1__QIG72962.1__EVB98_040__00040
Bact-VirMN988526.1__QIG72962.1__EVB98_040__00040
Identity
- Accession:
- MN988526 ↗
- Kingdom:
- phage
Quality
92.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-66
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2n17A00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.73 | 45.0 | 4.85e-01 | 73.8% | 73.2% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.61 | 42.0 | 4.63e-01 | 96.9% | 94.0% |
| 1nf2A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.60 | 43.0 | 3.69e-01 | 84.6% | 47.2% |
| 1kkmB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 47.0 | 3.60e-01 | 96.9% | 67.8% |
| 3r4cA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.58 | 41.0 | 3.63e-01 | 84.6% | 49.5% |
| 3daoA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.57 | 41.0 | 3.50e-01 | 84.6% | 45.9% |
| 3tqfA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 45.0 | 3.54e-01 | 95.4% | 72.1% |
| 3memA01 | 3.90.960.10 | Alpha Beta › Alpha-Beta Complex › YbaK protein › YbaK/aminoacyl-tRNA synthetase-associated domain | 0.57 | 44.0 | 3.54e-01 | 89.2% | 70.4% |
| 1ewqA02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.57 | 43.0 | 3.59e-01 | 83.1% | 86.4% |
| 2pk0A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.56 | 42.0 | 2.85e-01 | 80.0% | 34.8% |
| 1rkqA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.55 | 39.0 | 3.42e-01 | 84.6% | 45.8% |
| 2azpA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.55 | 39.0 | 2.97e-01 | 75.4% | 94.4% |
| 3s7iB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 40.0 | 2.99e-01 | 83.1% | 61.6% |
| 2b30A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.54 | 39.0 | 3.38e-01 | 84.6% | 46.8% |
| 1s3lA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.54 | 38.0 | 2.96e-01 | 76.9% | 78.8% |
| 2j3lA03 | 3.90.960.10 | Alpha Beta › Alpha-Beta Complex › YbaK protein › YbaK/aminoacyl-tRNA synthetase-associated domain | 0.54 | 44.0 | 3.58e-01 | 100.0% | 58.5% |
| 4zevA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.54 | 41.0 | 3.52e-01 | 84.6% | 58.9% |
| 2rbkA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.53 | 41.0 | 3.64e-01 | 87.7% | 63.4% |
| 5cadA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 39.0 | 2.90e-01 | 83.1% | 61.1% |
| 1ptmA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.52 | 40.0 | 2.67e-01 | 90.8% | 40.2% |
| 2j82A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.52 | 43.0 | 3.08e-01 | 100.0% | 85.1% |
| 2dt8A01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 35.0 | 2.80e-01 | 72.3% | 82.6% |
| 2pq0A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.51 | 36.0 | 3.20e-01 | 84.6% | 49.0% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3400462 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.70 | 49.0 | 5.12e-01 | 83.1% | 81.0% |
| 3373154 | 3397.1.1.0 ↗ | a+b complex topology › Tic22 › Tic22 › Tic22 | 0.63 | 48.0 | 4.52e-01 | 84.6% | 80.0% |
| 1002524 | 358.3.1.0 ↗ | a+b complex topology › SRCR-like › Putative uncharacterized protein TTHA0547 › Putative uncharacterized protein TTHA0547 | 0.61 | 51.0 | 4.56e-01 | 100.0% | 89.1% |
| 4538536 | 2006.1.1.37 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 | 0.58 | 44.0 | 2.98e-01 | 86.2% | 84.0% |
| 3470449 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.56 | 42.0 | 3.99e-01 | 83.1% | 93.8% |
| 145103 | 2006.1.1.37 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 | 0.55 | 39.0 | 2.75e-01 | 80.0% | 82.2% |
| 3435593 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.54 | 39.0 | 3.36e-01 | 83.1% | 46.4% |
| 3988613 | 3012.1.1.4 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 | 0.54 | 38.0 | 3.33e-01 | 84.6% | 46.4% |
| 3419846 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.53 | 34.0 | 2.97e-01 | 100.0% | 41.0% |
| 3942893 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.53 | 37.0 | 3.31e-01 | 84.6% | 49.0% |
| 2075062 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.53 | 41.0 | 3.64e-01 | 87.7% | 63.4% |
| 3588685 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.53 | 37.0 | 3.32e-01 | 84.6% | 50.5% |
| 2076068 | 3012.1.1.4 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 | 0.52 | 39.0 | 3.45e-01 | 84.6% | 59.4% |
| 3460821 | 2002.1.1.11 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PK | 0.52 | 42.0 | 2.96e-01 | 93.8% | 54.7% |
| 3588327 | 2010.1.1.1 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV | 0.52 | 36.0 | 2.84e-01 | 72.3% | 84.0% |
| 4033892 | 3012.1.1.4 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 | 0.52 | 36.0 | 3.24e-01 | 84.6% | 49.0% |
| 5048876 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.51 | 37.0 | 3.75e-01 | 96.9% | 81.5% |