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MN988527.1__QIG73005.1__EVB99_014__00014

Bact-Vir

MN988527.1__QIG73005.1__EVB99_014__00014

Identity

Accession:
MN988527 ↗
Kingdom:
phage

Quality

71.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-72
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 50.0 5.25e-01 77.1% 77.4%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 52.0 5.68e-01 80.0% 88.1%
2i9yA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.72 61.0 4.72e-01 94.3% 68.2%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.68 61.0 4.57e-01 100.0% 41.8%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 50.0 5.23e-01 91.4% 86.2%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 46.0 4.74e-01 81.4% 75.0%
2le1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.67 56.0 4.37e-01 92.9% 62.9%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 50.0 5.23e-01 85.7% 90.3%
2kc8A00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.64 43.0 3.92e-01 100.0% 51.6%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 45.0 4.64e-01 84.3% 78.8%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.63 55.0 5.38e-01 95.7% 92.1%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 48.0 3.87e-01 82.9% 56.0%
2mqdA00 3.30.1460.60 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.61 46.0 3.90e-01 81.4% 47.9%
2gc9B00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 52.0 4.05e-01 98.6% 49.1%
4l8hB00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.59 46.0 3.88e-01 85.7% 56.9%
1qwyA02 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.59 53.0 3.96e-01 100.0% 64.0%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 46.0 3.03e-01 90.0% 25.2%
1mpgA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.58 46.0 3.96e-01 95.7% 53.6%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 51.0 3.30e-01 100.0% 27.9%
4ftxB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.58 45.0 3.70e-01 100.0% 46.1%
8eg0B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 50.0 3.25e-01 100.0% 26.3%
2aq5A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 51.0 3.28e-01 100.0% 26.7%
1vwxo00 3.10.450.80 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 40.0 3.55e-01 72.9% 82.7%
2grvA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.58 49.0 3.69e-01 94.3% 94.8%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.57 43.0 3.74e-01 85.7% 56.6%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.57 46.0 4.18e-01 92.9% 78.0%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.57 47.0 4.21e-01 94.3% 69.2%
4ozuA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 49.0 3.16e-01 100.0% 27.7%
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.56 51.0 4.00e-01 100.0% 66.4%
7uhyA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 49.0 3.21e-01 100.0% 27.1%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.55 45.0 4.23e-01 97.1% 73.9%
6fucA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 50.0 4.64e-01 100.0% 95.3%
3ffvA00 3.40.1580.20 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Syd protein 0.55 40.0 3.05e-01 80.0% 35.9%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 3.10e-01 100.0% 26.2%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.55 44.0 3.76e-01 90.0% 67.8%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 46.0 3.03e-01 100.0% 27.5%
3fvzA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 47.0 3.07e-01 100.0% 29.5%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.54 43.0 4.33e-01 100.0% 90.1%
7a0kA01 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.53 41.0 2.84e-01 87.1% 27.1%
4bbwA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.53 40.0 2.70e-01 90.0% 32.9%
3g4eA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 44.0 3.03e-01 100.0% 33.7%
7xr9E01 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 45.0 3.30e-01 98.6% 82.7%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 42.0 3.63e-01 94.3% 60.0%
1sr4A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 42.0 3.36e-01 98.6% 65.3%
1cb8A03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.51 41.0 3.63e-01 92.9% 73.6%
4a0tA01 6.20.80.10 Special › Other non-globular › Glycosyl hydrolase fold › 0.50 33.0 3.47e-01 81.4% 75.4%
1b63A01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.50 40.0 2.89e-01 88.6% 58.3%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3415621 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.71 53.0 5.66e-01 100.0% 91.7%
3847592 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 49.0 2.92e-01 75.7% 10.9%
3218349 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 50.0 4.54e-01 95.7% 57.9%
3248749 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.66 51.0 4.42e-01 92.9% 53.6%
3233686 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.66 47.0 3.77e-01 77.1% 53.8%
3873066 206.1.1.71 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo 0.65 52.0 3.24e-01 88.6% 23.6%
3879653 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.64 49.0 4.91e-01 84.3% 80.0%
3625247 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.63 50.0 4.31e-01 94.3% 54.5%
3467367 708.1.1.7 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DBD_Tnp_Mut 0.63 45.0 4.84e-01 98.6% 90.0%
3702063 331.9.1.5 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP4E_app_platf 0.63 51.0 4.40e-01 97.1% 56.9%
4978599 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 49.0 3.13e-01 87.1% 21.4%
3632777 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.62 52.0 3.74e-01 94.3% 42.4%
3898522 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 41.0 4.69e-01 71.4% 96.0%
3362446 5.1.3.100 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › RCC1_2 0.61 50.0 3.23e-01 90.0% 21.8%
4120507 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.60 49.0 4.45e-01 100.0% 65.3%
3663326 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.60 48.0 4.16e-01 100.0% 57.1%
3922884 5.1.4.271 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.60 52.0 3.33e-01 100.0% 24.2%
3219422 5.1.4.271 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.59 52.0 3.35e-01 100.0% 24.9%
3583675 5.1.4.321 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30361 0.59 51.0 3.33e-01 100.0% 31.2%
3536769 5.1.4.57 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PALB2_WD40 0.59 52.0 3.30e-01 100.0% 26.2%
3623290 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.58 46.0 4.35e-01 100.0% 70.6%
3271365 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 52.0 3.30e-01 100.0% 24.9%
3895845 6.1.1.3 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › IL1 0.58 47.0 3.84e-01 90.0% 98.5%
2985887 5.1.4.271 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.58 51.0 3.27e-01 100.0% 26.4%
4945471 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 41.0 4.24e-01 81.4% 80.0%
2774420 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.58 45.0 3.29e-01 84.3% 37.9%
3171604 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.57 40.0 3.98e-01 74.3% 84.0%
3818723 5.1.8.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › FBA_3 0.57 44.0 3.37e-01 85.7% 49.7%
4167587 4.1.1.178 beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 0.57 45.0 4.20e-01 84.3% 83.5%
4304850 5.1.4.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.57 49.0 3.20e-01 100.0% 26.2%
4392365 5.1.4.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.57 50.0 3.24e-01 100.0% 28.1%
3254253 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.57 45.0 3.49e-01 85.7% 45.8%
3960559 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.57 50.0 4.19e-01 100.0% 62.6%
3998243 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 49.0 3.19e-01 100.0% 27.4%
3382274 5.1.4.369 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N 0.56 50.0 2.81e-01 100.0% 10.4%
3741434 1.1.5.30 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_oxase_2 0.56 49.0 3.37e-01 98.6% 99.6%
3740664 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.56 43.0 3.82e-01 92.9% 57.0%
None 0.56 49.0 3.11e-01 100.0% 22.3%
3262392 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 50.0 3.29e-01 100.0% 23.3%
3429270 5.1.5.93 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N 0.56 49.0 2.99e-01 100.0% 18.1%
3300738 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.56 45.0 3.50e-01 85.7% 47.3%
3932344 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.56 47.0 3.10e-01 100.0% 29.4%
3194130 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.56 49.0 3.08e-01 100.0% 21.8%
3479960 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.55 48.0 3.11e-01 100.0% 29.0%
3481353 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 48.0 3.11e-01 100.0% 38.0%
143915 5.1.4.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.55 47.0 3.06e-01 100.0% 27.0%
3491951 5.1.4.220 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_2nd 0.55 48.0 3.09e-01 100.0% 37.1%
3579227 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 48.0 3.46e-01 100.0% 37.9%
1318584 5.1.4.418 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Lactonase 0.55 46.0 3.05e-01 100.0% 27.8%
3993563 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 48.0 2.95e-01 100.0% 19.8%
4388251 5.1.4.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.54 47.0 3.05e-01 100.0% 26.9%
4019945 5.1.4.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.54 46.0 2.97e-01 100.0% 30.5%
3675472 5.1.5.45 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PROPPIN 0.54 47.0 3.31e-01 100.0% 35.7%
5046773 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.54 44.0 3.05e-01 100.0% 39.3%
3574641 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.52 46.0 3.31e-01 100.0% 40.7%
3621570 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.52 45.0 2.88e-01 100.0% 24.6%
5791 295.1.1.6 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 0.52 42.0 3.64e-01 94.3% 60.5%
4856205 1032.1.1.2 alpha arrays › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › TcdA_TcdB_pore, PF30720 0.52 38.0 2.74e-01 80.0% 69.8%
3829068 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.51 44.0 3.12e-01 100.0% 39.1%
3588455 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.50 36.0 3.62e-01 85.7% 77.1%