←Back to structures

MN988530.1__QIG73235.1__EVC02_014__00014

Bact-Vir

MN988530.1__QIG73235.1__EVC02_014__00014

Identity

Accession:
MN988530 ↗
Kingdom:
phage

Quality

85.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kleczkowskavirus› Rhizobium_phage_RHph_N17

TaxID: 2509742

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-93
PDB
Domain cluster: rep: MN988487.1__QIG68238.1__EVB56_047__00047__D8-82
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 50.0 5.87e-01 91.8% 98.3%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 49.0 5.72e-01 92.9% 98.3%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 48.0 5.60e-01 90.6% 100.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 44.0 5.05e-01 91.8% 87.1%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 48.0 5.30e-01 92.9% 91.0%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 48.0 5.40e-01 90.6% 92.5%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 50.0 5.26e-01 98.8% 85.3%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 48.0 5.43e-01 94.1% 98.4%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 51.0 5.40e-01 97.6% 90.5%
8b2gA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 44.0 5.23e-01 82.4% 100.0%
1whmA01 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.60 47.0 5.10e-01 90.6% 100.0%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 38.0 4.21e-01 90.6% 90.3%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 38.0 3.84e-01 92.9% 67.5%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.58 48.0 4.56e-01 100.0% 75.0%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.58 41.0 3.59e-01 92.9% 48.5%
4by6B00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.56 36.0 2.93e-01 88.2% 33.7%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4335022 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 54.0 5.24e-01 95.3% 73.7%
3869065 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 53.0 5.05e-01 95.3% 70.0%
3171604 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 50.0 5.27e-01 94.1% 90.7%
4171942 4.1.1.178 ↗ beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 0.63 50.0 4.67e-01 94.1% 68.3%
3204891 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 50.0 5.30e-01 90.6% 97.3%
3842361 1.1.5.76 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT 0.58 47.0 4.61e-01 95.3% 81.1%
3924850 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.52 44.0 3.85e-01 90.6% 67.2%
4000737 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.52 45.0 3.91e-01 95.3% 69.2%
2831853 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.52 48.0 3.82e-01 100.0% 59.1%