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MN988531.1__QIG73399.1__EVC03_091__00090

Bact-Vir

MN988531.1__QIG73399.1__EVC03_091__00090

Identity

Accession:
MN988531 ↗
Kingdom:
phage

Quality

84.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-42
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qoyA00 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.87 50.0 2.88e-01 77.5% 7.6%
4a17H02 3.30.60.300 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.75 49.0 5.01e-01 70.0% 69.2%
4b6lA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.74 51.0 3.28e-01 72.5% 46.8%
1li5B01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.73 62.0 3.79e-01 100.0% 47.7%
2fhfA04 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.72 49.0 2.71e-01 72.5% 13.8%
1zxeC02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.71 53.0 3.39e-01 80.0% 24.9%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 48.0 3.82e-01 70.0% 82.9%
3oz6B02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.71 53.0 3.22e-01 80.0% 19.3%
2o0yB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 50.0 4.26e-01 75.0% 46.2%
3c7jA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 3.99e-01 80.0% 38.5%
2vx3C02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.70 52.0 3.17e-01 80.0% 20.3%
1p65A00 6.10.140.90 Special › Helix non-globular › Helix Hairpins › 0.70 52.0 4.66e-01 82.5% 64.9%
4jqfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 4.18e-01 80.0% 42.5%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.68 46.0 3.15e-01 72.5% 25.0%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 4.13e-01 80.0% 47.9%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 3.89e-01 80.0% 37.2%
6ketA01 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.67 48.0 2.80e-01 77.5% 9.9%
3uqcD02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.65 45.0 3.05e-01 72.5% 35.3%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 4.54e-01 100.0% 61.3%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 3.74e-01 95.0% 52.2%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 3.92e-01 85.0% 43.5%
1f02T00 4.10.820.10 Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain 0.64 48.0 4.15e-01 85.0% 63.6%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 4.22e-01 92.5% 60.3%
3zqcA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 40.0 3.49e-01 82.5% 42.2%
3b73B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 50.0 3.95e-01 92.5% 52.8%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 4.45e-01 100.0% 62.5%
4yo2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 4.10e-01 85.0% 53.5%
2fmyA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 52.0 4.18e-01 97.5% 58.5%
1j75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 45.0 4.08e-01 80.0% 61.4%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.61 45.0 3.58e-01 82.5% 41.0%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 47.0 4.01e-01 82.5% 66.7%
4x0qA04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.60 50.0 3.45e-01 97.5% 39.6%
4dsfA04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.59 49.0 3.68e-01 100.0% 51.8%
3sigA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.58 50.0 3.07e-01 100.0% 25.7%
4o7iA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.58 51.0 3.26e-01 100.0% 55.5%
1ka1A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.57 51.0 3.17e-01 100.0% 56.6%
2l4mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 39.0 3.39e-01 80.0% 44.9%
2vx7A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 48.0 2.81e-01 100.0% 72.2%
3mt1A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.54 39.0 2.78e-01 80.0% 95.6%
2sqcA02 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.54 46.0 2.75e-01 95.0% 79.0%
5ko9A00 3.90.1680.10 Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like 0.51 36.0 2.33e-01 87.5% 28.9%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3193632 109.4.1.356 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.81 50.0 2.76e-01 70.0% 4.8%
4217857 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 57.0 4.86e-01 80.0% 49.2%
3989612 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 57.0 4.98e-01 80.0% 53.3%
3187272 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.77 53.0 2.98e-01 72.5% 33.2%
5055185 4120.1.1.0 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP 0.77 66.0 5.77e-01 97.5% 70.0%
3976628 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.76 52.0 4.19e-01 72.5% 86.7%
4276676 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.74 55.0 4.46e-01 80.0% 42.7%
4975458 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 54.0 4.81e-01 77.5% 53.4%
3288783 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.74 51.0 3.99e-01 72.5% 76.5%
3640451 109.16.1.2 alpha superhelices › Repetitive alpha hairpins › TROVE domain-like › TROVE domain-like › DUF2828 0.74 50.0 2.85e-01 70.0% 27.9%
5036196 2002.1.1.57 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D 0.74 48.0 2.91e-01 75.0% 10.8%
3960563 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 51.0 4.41e-01 80.0% 46.2%
3796903 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.73 53.0 4.11e-01 77.5% 36.5%
4926938 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 4.77e-01 92.5% 53.8%
4981968 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 53.0 5.19e-01 82.5% 86.7%
4191159 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 55.0 4.82e-01 85.0% 55.0%
3262478 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 54.0 4.50e-01 80.0% 45.7%
4937874 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.72 52.0 4.44e-01 77.5% 47.7%
4260408 3987.1.1.0 a+b complex topology › Type III R-M system modification subunit target recognition domain › Type III R-M system modification subunit target recognition domain › Type III R-M system modification subunit target recognition domain 0.72 60.0 4.68e-01 92.5% 60.0%
3639045 7015.1.1.1 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC 0.72 54.0 3.21e-01 95.0% 11.6%
5046083 3987.1.1.0 a+b complex topology › Type III R-M system modification subunit target recognition domain › Type III R-M system modification subunit target recognition domain › Type III R-M system modification subunit target recognition domain 0.70 58.0 4.55e-01 92.5% 55.3%
4083434 5069.1.1.53 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › UPF0182 0.70 54.0 3.52e-01 85.0% 18.9%
3262645 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 4.39e-01 95.0% 48.4%
3965527 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 49.0 3.87e-01 80.0% 36.5%
4957076 101.1.9.134 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2067 0.68 54.0 4.80e-01 90.0% 66.7%
3902830 11.1.1.680 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_CFAP65_4th 0.68 49.0 2.72e-01 77.5% 5.9%
3839545 2003.1.5.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.68 51.0 2.94e-01 85.0% 10.9%
3788382 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.68 52.0 4.24e-01 87.5% 55.0%
3462112 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.67 50.0 3.95e-01 80.0% 37.6%
4486101 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 57.0 4.10e-01 100.0% 55.2%
4939027 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.66 54.0 3.83e-01 90.0% 80.8%
5017776 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.66 48.0 2.93e-01 77.5% 18.8%
4970822 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 56.0 4.99e-01 100.0% 70.0%
3372110 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.66 51.0 4.26e-01 85.0% 48.6%
3376654 3289.1.1.0 alpha complex topology › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 0.66 53.0 2.80e-01 90.0% 32.3%
3378595 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.66 50.0 3.57e-01 85.0% 27.2%
4940863 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 49.0 3.89e-01 80.0% 38.6%
5015219 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 49.0 3.86e-01 85.0% 36.8%
3287501 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 52.0 4.25e-01 95.0% 49.4%
2390055 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.65 50.0 4.11e-01 87.5% 48.1%
4549781 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 52.0 3.72e-01 100.0% 66.4%
3643333 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.65 49.0 3.87e-01 85.0% 38.9%
4947701 101.1.2.882 alpha arrays › HTH › HTH › winged helix domain › FeoA 0.64 54.0 4.17e-01 100.0% 44.0%
None 0.64 53.0 3.80e-01 95.0% 55.4%
3705119 4970.1.1.2 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A 0.64 55.0 3.47e-01 97.5% 38.5%
5027549 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.63 47.0 3.77e-01 80.0% 45.0%
4058198 101.1.2.170 alpha arrays › HTH › HTH › winged helix domain › HTH_51 0.63 55.0 3.79e-01 100.0% 30.0%
3611141 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.62 48.0 3.97e-01 90.0% 52.5%
4949793 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.62 54.0 3.78e-01 100.0% 59.2%
3901233 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.62 54.0 3.30e-01 100.0% 84.7%
3780643 101.1.2.36 alpha arrays › HTH › HTH › winged helix domain › z-alpha 0.61 43.0 3.55e-01 80.0% 37.5%
3406541 573.1.1.0 alpha duplicates or obligate multimers › Soluble domain of poliovirus core protein 3a › Soluble domain of poliovirus core protein 3a › Soluble domain of poliovirus core protein 3a 0.61 38.0 4.45e-01 75.0% 86.7%
4240820 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 49.0 3.60e-01 100.0% 52.7%
5047660 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 46.0 3.97e-01 95.0% 85.3%
3611776 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.58 40.0 2.89e-01 77.5% 37.1%
4995740 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.58 45.0 3.09e-01 82.5% 26.4%
4955046 7573.1.1.0 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like 0.57 46.0 3.03e-01 92.5% 69.9%
3301914 109.27.1.3 alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › NPH3 0.57 51.0 3.24e-01 100.0% 32.0%
3169050 101.1.2.94 alpha arrays › HTH › HTH › winged helix domain › ANAPC2 0.56 48.0 3.70e-01 97.5% 47.3%
3788383 316.1.1.14 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD 0.56 47.0 2.67e-01 100.0% 21.7%
4166178 101.1.8.4 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Flp_C 0.55 45.0 3.34e-01 97.5% 68.3%
5011004 7523.1.1.3 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 0.55 37.0 2.48e-01 72.5% 15.6%
3960857 628.1.1.1 alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD 0.55 40.0 2.79e-01 82.5% 68.2%
3228847 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.54 41.0 3.60e-01 100.0% 57.5%
5063096 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.53 45.0 2.77e-01 100.0% 100.0%
4975847 205.1.1.0 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.52 37.0 3.39e-01 80.0% 75.0%