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MN988535.1__QIG74242.1__EVC07_214__00214

Bact-Vir

MN988535.1__QIG74242.1__EVC07_214__00214

Identity

Accession:
MN988535 ↗
Kingdom:
phage

Quality

45.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhizobium_phage_RHph_N42

TaxID: 2509752

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 419-503
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pbkA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.54 39.0 3.65e-01 76.5% 62.0%
5d0yA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.52 45.0 3.68e-01 94.1% 83.2%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.52 38.0 4.11e-01 87.1% 90.1%
4nnzA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.52 45.0 3.42e-01 96.5% 57.0%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3254787 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 44.0 3.77e-01 71.8% 87.4%
5055909 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.56 41.0 2.73e-01 77.6% 84.7%
3479087 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.54 41.0 2.74e-01 81.2% 80.2%
3513384 109.4.1.263 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UVSSA_N 0.54 42.0 3.79e-01 84.7% 88.3%
3632364 603.1.1.120 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF846 0.54 42.0 3.47e-01 87.1% 84.8%
3635930 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.52 42.0 3.51e-01 90.6% 86.5%
1721533 139.2.1.17 ↗ few secondary structure elements › Multiheme cytochromes › Di-heme elbow motif › Di-heme elbow motif › Cytochrome_C554, Multi-haem_cyto 0.52 40.0 2.48e-01 83.5% 58.2%
3237013 101.1.2.4 ↗ alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.51 36.0 3.11e-01 72.9% 62.3%
D2 medium residues 190-383
PDB