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MN988536.1__QIG74328.1__EVC08_016__00016
Bact-VirMN988536.1__QIG74328.1__EVC08_016__00016
Identity
- Accession:
- MN988536 ↗
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-69
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vw4801 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.60 | 42.0 | 4.14e-01 | 87.9% | 68.5% |
| 1zv1A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.59 | 28.0 | 3.00e-01 | 89.4% | 45.8% |
| 4gytA00 | 1.20.120.740 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YgfB uncharacterised protein family PF03695 | 0.57 | 45.0 | 3.36e-01 | 87.9% | 85.9% |
| 2r1iA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 48.0 | 3.93e-01 | 97.0% | 76.2% |
| 1iqcA02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.53 | 45.0 | 3.55e-01 | 100.0% | 76.0% |
| 8cuyA01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.53 | 43.0 | 4.20e-01 | 92.4% | 82.4% |
| 2rfqC03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.52 | 42.0 | 3.30e-01 | 100.0% | 63.4% |
| 2n98A00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.52 | 39.0 | 3.64e-01 | 86.4% | 63.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4120406 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.59 | 43.0 | 3.77e-01 | 81.8% | 96.4% |
| 3974103 | 101.1.4.16 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 | 0.59 | 49.0 | 4.65e-01 | 100.0% | 84.7% |
| 3696393 | 601.13.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar export chaperone FliS › Flagellar export chaperone FliS | 0.56 | 43.0 | 3.36e-01 | 87.9% | 84.4% |
| 3804077 | 3722.1.1.3 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › DUF3490 | 0.55 | 43.0 | 4.23e-01 | 89.4% | 96.0% |
| 8229 | 378.1.1.5 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_1 | 0.53 | 40.0 | 2.84e-01 | 83.3% | 94.3% |
| 3973905 | 5039.1.1.1 ↗ | alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › COX3 | 0.52 | 41.0 | 2.71e-01 | 87.9% | 32.1% |
| 3355508 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.51 | 38.0 | 3.31e-01 | 81.8% | 72.4% |
| 4968149 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.51 | 42.0 | 3.33e-01 | 100.0% | 92.3% |
| 3218643 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.50 | 35.0 | 3.03e-01 | 72.7% | 85.7% |