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MN988540.1__QIG74880.1__EVC12_245__00245

Bact-Vir

MN988540.1__QIG74880.1__EVC12_245__00245

Identity

Accession:
MN988540 ↗
Kingdom:
phage

Quality

92.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-80
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hs7A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.87 81.0 7.48e-01 100.0% 95.9%
2h7oA01 1.20.120.1330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Rac1-binding domain, N-terminal GTPase binding subdomain 0.87 76.0 6.46e-01 96.2% 60.2%
3zc0D00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.86 79.0 5.85e-01 98.7% 45.5%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.85 70.0 6.31e-01 88.6% 100.0%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.85 73.0 6.66e-01 91.1% 97.0%
1ugoA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.84 77.0 7.07e-01 98.7% 85.9%
3fhnA01 6.10.280.210 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain A 0.84 78.0 5.78e-01 100.0% 47.3%
3kmiA00 1.20.120.940 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Putative aromatic acid exporter, C-terminal domain 0.83 69.0 5.26e-01 88.6% 50.0%
1quuA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.83 76.0 6.43e-01 100.0% 84.1%
3axjB01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.80 73.0 5.77e-01 100.0% 61.9%
2d9dA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.79 71.0 6.79e-01 97.5% 93.3%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 70.0 5.31e-01 100.0% 45.2%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 66.0 6.15e-01 91.1% 99.0%
1j5wA02 1.20.58.180 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 0.78 66.0 6.68e-01 92.4% 94.8%
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 59.0 5.56e-01 79.7% 92.4%
2rkkA01 1.25.40.270 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 0.77 68.0 5.48e-01 100.0% 53.8%
1w99A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.77 69.0 5.32e-01 100.0% 54.9%
4d8mA01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.76 68.0 4.93e-01 98.7% 93.5%
1fpoC02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.76 61.0 5.89e-01 88.6% 91.2%
8ek4A01 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.75 64.0 5.43e-01 96.2% 91.0%
2l3lA01 1.20.58.1250 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain 0.74 66.0 6.00e-01 100.0% 76.4%
2l10A00 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.74 65.0 5.24e-01 100.0% 58.2%
3h1nA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.74 63.0 5.52e-01 94.9% 82.5%
1bf5A01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.73 58.0 4.52e-01 84.8% 73.2%
1xzpA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.73 64.0 4.99e-01 97.5% 60.8%
2rd0B00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.73 51.0 4.21e-01 73.4% 100.0%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.73 49.0 4.70e-01 70.9% 93.6%
4ackB00 1.25.40.590 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU 0.71 60.0 4.84e-01 93.7% 54.9%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.71 61.0 5.38e-01 97.5% 98.3%
7ymiZ01 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.70 48.0 5.39e-01 70.9% 100.0%
1v9vA01 1.20.1480.20 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › MAST3 pre-PK domain-like 0.70 55.0 5.24e-01 87.3% 75.8%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.70 55.0 5.38e-01 86.1% 93.1%
2ke4A00 6.10.140.470 Special › Helix non-globular › Helix Hairpins › 0.69 47.0 4.39e-01 70.9% 87.8%
3teqB00 1.10.287.3550 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 49.0 4.52e-01 77.2% 100.0%
1jogA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.67 51.0 4.26e-01 81.0% 90.4%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.67 41.0 4.19e-01 73.4% 62.0%
6vudA01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.66 56.0 5.12e-01 96.2% 97.2%
3h3mA00 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.66 55.0 5.36e-01 93.7% 95.5%
1zzpA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.66 54.0 4.78e-01 87.3% 67.0%
2kkmA01 1.20.1440.170 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Translation machinery-associated protein 16-like 0.66 47.0 4.06e-01 75.9% 96.0%
1bhaA00 1.10.287.170 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 45.0 4.79e-01 70.9% 85.1%
2j9wB00 1.20.120.1130 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vps28 C-terminal domain 0.61 52.0 4.83e-01 93.7% 80.8%
2wzkA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.60 48.0 4.39e-01 89.9% 82.7%
1e1dA02 1.20.1270.20 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.57 51.0 4.99e-01 98.7% 94.0%
2lvfA00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.56 43.0 3.91e-01 86.1% 78.1%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4971843 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.92 82.0 7.85e-01 93.7% 94.4%
4996069 604.10.1.0 alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac 0.91 85.0 8.08e-01 98.7% 97.8%
3314530 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.87 77.0 7.06e-01 94.9% 86.0%
3168273 1134.1.1.0 alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.86 68.0 7.39e-01 86.1% 100.0%
3495915 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.86 80.0 5.41e-01 100.0% 41.2%
3560925 604.1.1.20 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › AKNA 0.86 75.0 6.62e-01 93.7% 92.7%
3395229 192.15.1.115 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Use1 0.86 70.0 7.36e-01 86.1% 100.0%
3684493 109.4.1.213 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FancD2 0.85 78.0 4.97e-01 100.0% 25.4%
4990095 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.84 71.0 6.92e-01 89.9% 90.6%
3318923 603.1.1.124 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE, V-SNARE_C 0.84 77.0 6.08e-01 100.0% 63.9%
3757569 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.83 76.0 6.39e-01 100.0% 93.8%
4100527 604.8.1.2 alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo › Mitofilin 0.83 75.0 6.34e-01 97.5% 85.6%
3907213 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.83 74.0 6.79e-01 96.2% 100.0%
3872783 604.3.1.1 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.83 76.0 6.97e-01 98.7% 88.0%
3479092 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.83 77.0 7.03e-01 100.0% 96.0%
4032384 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.83 73.0 7.34e-01 96.2% 100.0%
3732909 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.83 69.0 6.96e-01 89.9% 100.0%
3405261 604.22.1.1 alpha bundles › Spectrin repeat-like › tubulin binding cofactor C N-terminal domain › tubulin binding cofactor C N-terminal domain › TBCC_N 0.82 76.0 6.50e-01 100.0% 75.0%
3228341 604.1.1.55 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › RasGAP_C 0.81 73.0 6.44e-01 100.0% 82.6%
4947322 192.15.1.1 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › VPS28 0.81 65.0 5.70e-01 86.1% 71.3%
3940580 604.6.1.14 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › RasGAP_C 0.81 73.0 6.40e-01 100.0% 86.1%
3312910 603.1.1.111 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TBCC_N 0.80 73.0 7.00e-01 100.0% 98.9%
3638386 603.1.1.111 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TBCC_N 0.80 71.0 6.45e-01 97.5% 83.8%
3478117 603.1.1.17 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE 0.80 71.0 5.36e-01 100.0% 55.8%
3704188 192.15.1.1 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › VPS28 0.80 66.0 6.18e-01 88.6% 90.5%
3516162 603.1.1.23 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Sec20 0.79 71.0 5.53e-01 100.0% 60.6%
3871271 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.79 71.0 4.99e-01 100.0% 43.3%
3932690 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.78 70.0 6.70e-01 100.0% 94.4%
4022048 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.77 69.0 5.34e-01 100.0% 74.3%
3391259 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.77 70.0 6.70e-01 100.0% 93.3%
3793986 604.7.1.7 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › Mitofilin 0.77 68.0 5.72e-01 98.7% 95.6%
3710653 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 65.0 4.90e-01 93.7% 52.6%
4958049 4204.1.1.5 alpha bundles › AF0941-like › AF0941-like › AF0941-like › DUF2150 0.75 64.0 5.74e-01 93.7% 90.9%
4974234 604.12.1.141 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › 8xMP 0.74 65.0 6.44e-01 98.7% 100.0%
1145703 604.5.1.3 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › ArAE_1_C 0.74 67.0 6.35e-01 100.0% 100.0%
5045531 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.74 60.0 5.86e-01 88.6% 87.1%
3973899 5086.1.1.92 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE 0.73 50.0 4.10e-01 70.9% 95.9%
3484774 622.1.1.1 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.72 61.0 5.62e-01 94.9% 91.4%
5078867 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.72 61.0 5.88e-01 94.9% 100.0%
3621359 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.72 59.0 5.80e-01 91.1% 88.2%
4967183 4204.1.1.5 alpha bundles › AF0941-like › AF0941-like › AF0941-like › DUF2150 0.72 61.0 4.66e-01 93.7% 54.4%
3978264 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.71 50.0 3.98e-01 96.2% 38.0%
5082279 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.71 62.0 5.46e-01 100.0% 73.3%
5022737 1030.1.1.1 alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Csm2_III-A 0.71 60.0 4.65e-01 92.4% 45.6%
3169705 601.4.1.36 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › Aip3p_Bud6_N 0.70 61.0 5.23e-01 97.5% 63.8%
3931480 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.70 61.0 5.84e-01 94.9% 91.1%
3737909 192.29.1.254 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Aip3p_Bud6_N 0.70 61.0 5.18e-01 97.5% 63.8%
5046133 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.69 60.0 5.81e-01 96.2% 95.6%
3334062 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.68 59.0 5.85e-01 100.0% 97.6%
3583915 192.29.1.51 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › TMEM138 0.66 59.0 4.92e-01 100.0% 71.4%
3784055 192.24.1.0 alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain 0.66 49.0 4.21e-01 81.0% 94.6%
3763961 109.4.1.1385 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IF140_C, TPR_IF140-IFT172 0.66 58.0 5.01e-01 97.5% 85.0%
3967073 601.3.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain 0.65 58.0 5.06e-01 100.0% 65.8%
4949044 601.3.1.1 alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.65 53.0 4.86e-01 96.2% 67.3%
5006972 5045.1.1.3 alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › V_ATPase_I 0.63 47.0 3.29e-01 81.0% 26.8%
3989535 632.6.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit 0.62 57.0 5.39e-01 100.0% 95.8%
4983097 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.61 55.0 4.94e-01 100.0% 82.7%
3797551 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.61 55.0 3.71e-01 100.0% 53.1%
5062044 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.56 49.0 4.94e-01 100.0% 96.2%