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MN988542.1__QIG75053.1__EVC14_055__00055

Bact-Vir

MN988542.1__QIG75053.1__EVC14_055__00055

Identity

Accession:
MN988542 ↗
Kingdom:
phage

Quality

71.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhizobium_phage_RHph_I3_18

TaxID: 2509732

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-50
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 76.0 6.77e-01 97.9% 65.6%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.87 56.0 3.76e-01 76.6% 20.0%
7xi5A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 54.0 5.26e-01 78.7% 64.7%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 5.19e-01 93.6% 56.1%
2mezA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 48.0 3.76e-01 76.6% 31.4%
1irzA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 55.0 5.07e-01 100.0% 71.9%
2pmlX02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.63 51.0 3.37e-01 93.6% 46.3%
3cecA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 54.0 4.35e-01 100.0% 83.5%
1dp3A00 1.10.10.450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › TraM protein, DNA-binding 0.59 43.0 4.10e-01 78.7% 69.1%
1olmC01 3.40.525.10 Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain 0.58 51.0 3.13e-01 100.0% 19.1%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3588551 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.87 71.0 6.54e-01 100.0% 70.0%
3943462 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.84 67.0 6.37e-01 97.9% 74.5%
3949663 101.1.1.307 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF3071 0.79 50.0 5.40e-01 80.9% 77.5%
5077607 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 60.0 5.51e-01 89.4% 65.0%
3544647 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.77 61.0 5.48e-01 100.0% 63.1%
3409145 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.77 56.0 5.56e-01 91.5% 74.0%
4010719 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.77 54.0 5.31e-01 83.0% 70.0%
4977917 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 62.0 4.87e-01 89.4% 46.3%
3185431 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 51.0 5.19e-01 97.9% 82.2%
4942943 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.68 52.0 4.05e-01 87.2% 41.8%
3957316 101.1.1.266 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut 0.67 56.0 5.12e-01 97.9% 72.3%
3958041 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 56.0 5.10e-01 97.9% 72.3%
1284299 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.66 52.0 3.69e-01 89.4% 29.0%
3623357 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.66 53.0 5.14e-01 97.9% 81.8%
5051269 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 50.0 4.27e-01 89.4% 52.9%
3328458 101.1.1.3 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.61 50.0 4.68e-01 100.0% 74.2%