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MN988543.1__QIG75210.1__EVC15_148__00148

Bact-Vir

MN988543.1__QIG75210.1__EVC15_148__00148

Identity

Accession:
MN988543 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhizobium_phage_RHph_N2_6

TaxID: 2509744

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-68
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.66 44.0 3.90e-01 78.4% 46.7%
1v9vA01 1.20.1480.20 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › MAST3 pre-PK domain-like 0.61 45.0 3.76e-01 82.4% 63.2%
5e9hB01 1.10.10.850 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.58 48.0 3.83e-01 98.0% 85.0%
2rbdA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.56 48.0 3.50e-01 100.0% 85.3%
4eqqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 34.0 3.49e-01 74.5% 68.8%
3c1oA02 3.90.25.10 Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 0.52 41.0 3.08e-01 86.3% 78.3%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4958365 3317.1.1.0 ↗ alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain 0.65 45.0 4.40e-01 72.5% 78.2%
3977558 639.2.1.3 ↗ alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › BDM 0.62 46.0 4.52e-01 80.4% 78.2%
3407209 4.1.1.41 ↗ beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.55 42.0 2.91e-01 82.4% 57.1%
3826185 143.1.1.2 ↗ alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain › PABC_AtC3H46 0.55 38.0 3.75e-01 74.5% 90.9%
3226006 367.1.1.2 ↗ few secondary structure elements › Insulin-like › Insulin-like › Insulin-like › Ins_beta 0.52 36.0 3.78e-01 78.4% 93.3%
3713700 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.50 41.0 2.97e-01 100.0% 63.5%