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MN988546.1__QIG75475.1__EVC18_033__00032
Bact-VirMN988546.1__QIG75475.1__EVC18_033__00032
Identity
- Accession:
- MN988546 ↗
- Kingdom:
- phage
Quality
82.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 36-96
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 74.0 | 6.06e-01 | 95.1% | 86.8% |
| 6wlvB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.79 | 60.0 | 3.89e-01 | 80.3% | 27.0% |
| 2pohA02 | 6.10.140.940 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 57.0 | 5.24e-01 | 93.4% | 63.6% |
| 4upkA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.73 | 61.0 | 3.64e-01 | 93.4% | 36.1% |
| 1nu7D01 | 1.20.120.750 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle domain 1 | 0.70 | 62.0 | 4.81e-01 | 100.0% | 70.4% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 57.0 | 5.01e-01 | 95.1% | 90.4% |
| 4l3uA00 | 1.20.1480.40 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 | 0.67 | 54.0 | 4.23e-01 | 86.9% | 48.0% |
| 6oi7A01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.58 | 50.0 | 3.45e-01 | 93.4% | 45.9% |
| 2y8kA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 40.0 | 2.58e-01 | 80.3% | 83.9% |
| 6bk0A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 43.0 | 2.87e-01 | 91.8% | 25.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3516337 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.80 | 69.0 | 5.64e-01 | 95.1% | 73.6% |
| 3009971 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.77 | 66.0 | 5.84e-01 | 95.1% | 89.8% |
| 3937187 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.74 | 63.0 | 5.16e-01 | 93.4% | 77.3% |
| 3786162 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.71 | 59.0 | 5.15e-01 | 93.4% | 92.6% |
| 3634185 | 5059.1.1.23 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › DUF2418 | 0.70 | 55.0 | 4.33e-01 | 85.2% | 43.2% |
| 3952658 | 2484.1.1.113 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › baeRF_family2 | 0.69 | 62.0 | 4.88e-01 | 100.0% | 68.8% |
| 3728497 | 4207.1.1.43 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › THOC7 | 0.69 | 60.0 | 5.24e-01 | 95.1% | 74.4% |
| 3676538 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.68 | 60.0 | 4.32e-01 | 96.7% | 48.8% |
| 3530636 | 192.29.1.103 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › TADA2A-like_3rd | 0.67 | 57.0 | 5.09e-01 | 93.4% | 77.6% |
| 3402925 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.67 | 50.0 | 3.66e-01 | 82.0% | 64.6% |
| 3591691 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.66 | 44.0 | 3.88e-01 | 73.8% | 45.3% |
| 3386015 | 5086.1.1.223 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PF28155 | 0.57 | 48.0 | 4.54e-01 | 98.4% | 94.7% |
| 4263256 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.55 | 42.0 | 2.94e-01 | 80.3% | 86.3% |
| 4074261 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.54 | 47.0 | 3.55e-01 | 98.4% | 49.3% |