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MN988547.1__QIG75594.1__EVC19_023__00023
Bact-VirMN988547.1__QIG75594.1__EVC19_023__00023
Identity
- Accession:
- MN988547 ↗
- Kingdom:
- phage
Quality
82.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-116
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ohgA01 | 3.30.2400.10 | Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › Major capsid protein gp5 | 0.61 | 50.0 | 4.60e-01 | 87.8% | 100.0% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 33.0 | 3.78e-01 | 73.0% | 71.1% |
| 1khmA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.60 | 36.0 | 3.99e-01 | 72.2% | 75.3% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 33.0 | 3.62e-01 | 73.0% | 68.1% |
| 5flmA02 | 3.30.1360.140 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.57 | 36.0 | 3.42e-01 | 79.1% | 53.7% |
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 25.0 | 3.20e-01 | 78.3% | 72.3% |
| 6i9gA01 | 3.30.2400.30 | Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › | 0.55 | 43.0 | 3.83e-01 | 85.2% | 81.1% |
| 3dktA01 | 3.30.2400.30 | Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › | 0.53 | 43.0 | 3.79e-01 | 87.0% | 82.2% |
| 2k3iA01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 31.0 | 3.48e-01 | 80.9% | 75.3% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.51 | 28.0 | 3.09e-01 | 97.4% | 63.2% |
| 4rl1A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.51 | 29.0 | 3.49e-01 | 97.4% | 88.7% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1877546 | 2485.3.1.0 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 | 0.63 | 51.0 | 3.80e-01 | 87.8% | 90.0% |
| 4313471 | 2485.3.1.11 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › SrpI-like | 0.61 | 50.0 | 3.67e-01 | 87.0% | 84.7% |
| 3532258 | 327.11.2.4 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › MOEP19 | 0.60 | 35.0 | 3.81e-01 | 85.2% | 68.4% |
| 3287506 | 304.8.1.22 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT | 0.60 | 32.0 | 3.48e-01 | 70.4% | 60.0% |
| 5027827 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.59 | 34.0 | 3.87e-01 | 71.3% | 75.3% |
| 2989289 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.58 | 47.0 | 3.45e-01 | 87.8% | 88.5% |
| 5077552 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.58 | 35.0 | 3.80e-01 | 71.3% | 71.6% |
| 3508539 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.58 | 34.0 | 3.81e-01 | 71.3% | 76.5% |
| 4959193 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.58 | 33.0 | 3.71e-01 | 70.4% | 74.1% |
| 3946670 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.57 | 50.0 | 3.77e-01 | 94.8% | 88.4% |
| 3518622 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.57 | 32.0 | 3.52e-01 | 72.2% | 65.3% |
| 4540833 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.56 | 33.0 | 3.74e-01 | 70.4% | 76.5% |
| 3977985 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.56 | 45.0 | 3.24e-01 | 87.8% | 73.9% |
| 3757456 | 327.11.2.4 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › MOEP19 | 0.55 | 32.0 | 3.89e-01 | 74.8% | 98.5% |
| 3555254 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.54 | 31.0 | 3.59e-01 | 81.7% | 78.8% |
| 3505380 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.54 | 32.0 | 3.49e-01 | 73.9% | 69.5% |
| 3649316 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.54 | 33.0 | 3.48e-01 | 71.3% | 68.0% |
| 3832146 | 304.8.1.68 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF493 | 0.53 | 33.0 | 3.58e-01 | 83.5% | 74.7% |
| 2553816 | 2485.3.1.2 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 | 0.53 | 45.0 | 3.42e-01 | 91.3% | 86.8% |
| 3823903 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.52 | 30.0 | 3.09e-01 | 79.1% | 57.4% |
| 4150953 | 256.1.1.1 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease | 0.52 | 32.0 | 3.83e-01 | 87.8% | 100.0% |
| 2724409 | 2485.3.1.2 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 | 0.51 | 41.0 | 3.22e-01 | 87.8% | 84.5% |
| 3213699 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.51 | 33.0 | 3.57e-01 | 81.7% | 78.9% |
| 5069302 | 256.1.1.1 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease | 0.51 | 29.0 | 3.60e-01 | 88.7% | 98.5% |