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MN988552.1__QIG76022.1__EVC24_001__00001

Bact-Vir

MN988552.1__QIG76022.1__EVC24_001__00001

Identity

Accession:
MN988552 ↗
Kingdom:
phage

Quality

92.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhizobium_phage_RHph_I4

TaxID: 2509735

Cluster

View cluster (14 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-139
PDB
Domain cluster: rep: IMGVR_UViG_2799112907_000002-2799112907-2800868825__D215-350
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06035.18 best Peptidase_C93 94.2 1.10e-26 100.0% 76.1%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fgoA00 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.88 80.0 6.87e-01 94.3% 70.2%
3isrA01 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.75 70.0 6.01e-01 98.4% 77.8%
3ef2A02 3.30.460.70 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.67 59.0 5.72e-01 94.3% 97.8%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 25.0 3.62e-01 94.3% 100.0%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.57 33.0 3.33e-01 97.6% 54.8%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 33.0 3.49e-01 100.0% 64.0%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 35.0 3.70e-01 100.0% 72.8%
3ihpA03 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 43.0 3.18e-01 87.8% 98.8%
5cvmA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 43.0 3.17e-01 85.4% 99.0%
1qmyA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 47.0 4.32e-01 95.9% 96.2%
6heiA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 40.0 2.93e-01 80.5% 88.3%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.52 46.0 3.98e-01 96.7% 86.2%
5chtB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 41.0 3.14e-01 86.2% 99.7%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 43.0 3.29e-01 92.7% 96.0%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.51 31.0 2.67e-01 88.6% 36.4%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.51 23.0 3.08e-01 78.0% 81.0%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1323187 219.1.1.38 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C93 0.92 81.0 6.92e-01 91.1% 68.5%
3974693 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.91 83.0 6.74e-01 94.3% 62.4%
5012995 219.1.1.76 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.83 74.0 6.13e-01 94.3% 79.5%
4995535 219.1.1.76 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.83 74.0 6.32e-01 94.3% 83.2%
5064007 219.1.1.76 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.82 72.0 6.21e-01 91.9% 79.4%
5043547 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.82 73.0 6.72e-01 94.3% 81.3%
4213984 219.1.1.76 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.82 73.0 6.42e-01 94.3% 77.1%
5032178 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.82 75.0 5.92e-01 96.7% 67.7%
4993029 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.82 70.0 6.51e-01 90.2% 78.7%
3871299 219.1.1.97 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.82 73.0 5.97e-01 94.3% 59.0%
5014419 219.1.1.76 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.81 73.0 5.83e-01 94.3% 71.6%
3929966 219.1.1.97 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.81 72.0 5.92e-01 94.3% 59.0%
3882396 219.1.1.97 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.81 72.0 5.72e-01 94.3% 53.9%
4968082 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.81 71.0 5.80e-01 93.5% 76.2%
3704372 219.1.1.97 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.80 69.0 5.36e-01 91.1% 48.8%
3627686 219.1.1.97 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.80 72.0 5.66e-01 95.1% 53.6%
3221476 219.1.1.97 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.80 71.0 5.74e-01 94.3% 54.1%
4634055 219.1.1.76 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.80 71.0 6.03e-01 94.3% 75.8%
5029334 219.1.1.76 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.79 70.0 6.29e-01 95.9% 81.5%
4945617 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.78 73.0 6.56e-01 98.4% 91.3%
2532980 219.1.1.53 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Vasohibin 0.78 69.0 5.33e-01 94.3% 64.6%
4978783 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.78 72.0 6.69e-01 98.4% 97.3%
5067408 219.1.1.97 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.77 69.0 5.91e-01 94.3% 70.1%
5054279 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.77 73.0 6.59e-01 100.0% 88.7%
5078205 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.76 72.0 6.35e-01 100.0% 95.9%
4953249 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.76 71.0 6.50e-01 98.4% 95.5%
4942072 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.76 70.0 6.20e-01 98.4% 95.3%
5064595 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.76 71.0 5.73e-01 100.0% 68.6%
3972374 219.1.1.96 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_i_TM 0.73 59.0 5.87e-01 93.5% 83.2%
5016546 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 33.0 4.18e-01 96.7% 85.3%
4099186 219.1.1.21 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 0.57 47.0 4.06e-01 87.0% 97.9%
3404595 219.1.1.14 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin 0.55 47.0 4.08e-01 89.4% 97.8%
3283097 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.55 31.0 3.25e-01 95.9% 60.0%
3762030 219.1.1.14 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin 0.54 45.0 4.56e-01 89.4% 96.0%
3600457 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.54 41.0 2.99e-01 80.5% 89.4%
3490907 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.53 45.0 3.20e-01 91.9% 92.3%
3606753 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.53 45.0 3.16e-01 90.2% 99.5%
5057900 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.53 37.0 3.51e-01 71.5% 75.9%
3426676 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 44.0 3.18e-01 91.9% 97.2%
7384 219.1.1.21 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 0.52 46.0 3.98e-01 96.7% 86.2%
3235400 220.1.1.132 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.52 33.0 3.79e-01 92.7% 88.8%
3636498 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 42.0 3.10e-01 89.4% 94.8%
3652683 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 42.0 3.05e-01 91.1% 97.7%
4017540 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 42.0 3.13e-01 89.4% 97.3%
3719044 219.1.1.112 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 0.51 42.0 3.08e-01 89.4% 90.6%
3734153 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 41.0 3.10e-01 87.0% 96.5%
3418449 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 40.0 2.82e-01 86.2% 74.0%
3271037 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 42.0 2.91e-01 89.4% 99.3%
3178434 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 42.0 3.04e-01 88.6% 96.3%
3743825 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 42.0 3.14e-01 89.4% 95.8%
3739929 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 41.0 3.12e-01 89.4% 95.6%
3711375 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.50 40.0 2.71e-01 86.2% 68.2%
3940760 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.50 41.0 3.08e-01 88.6% 98.7%
4318152 221.1.1.99 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UCH 0.50 35.0 2.38e-01 71.5% 63.4%