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MN988552.1__QIG76098.1__EVC24_077__00077
Bact-VirMN988552.1__QIG76098.1__EVC24_077__00077
Identity
- Accession:
- MN988552 ↗
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-82
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3q41B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 56.0 | 4.15e-01 | 92.5% | 76.1% |
| 3q0xA01 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.67 | 47.0 | 3.57e-01 | 73.1% | 83.9% |
| 4ms4B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 56.0 | 4.11e-01 | 94.0% | 77.2% |
| 4fczA00 | 3.10.450.710 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC | 0.65 | 44.0 | 3.20e-01 | 70.1% | 27.9% |
| 2a1vA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.65 | 44.0 | 3.46e-01 | 79.1% | 34.8% |
| 3om0A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 51.0 | 3.86e-01 | 86.6% | 68.8% |
| 2oq1A03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 46.0 | 4.11e-01 | 80.6% | 65.0% |
| 1fu1A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.62 | 43.0 | 3.59e-01 | 71.6% | 94.1% |
| 2wjwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 54.0 | 4.12e-01 | 100.0% | 67.5% |
| 2eobA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 45.0 | 3.87e-01 | 79.1% | 55.8% |
| 3h6gA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 50.0 | 3.84e-01 | 94.0% | 69.0% |
| 2v1lA00 | 3.10.450.430 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF2787 | 0.59 | 40.0 | 3.28e-01 | 70.1% | 46.5% |
| 1e2tA03 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.59 | 44.0 | 3.75e-01 | 82.1% | 55.6% |
| 2qzuA02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.58 | 39.0 | 3.68e-01 | 70.1% | 63.5% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.58 | 49.0 | 3.57e-01 | 92.5% | 49.7% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 47.0 | 4.17e-01 | 89.6% | 80.6% |
| 2f51A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 46.0 | 3.91e-01 | 88.1% | 95.5% |
| 1llnA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.57 | 39.0 | 3.05e-01 | 73.1% | 48.0% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.57 | 45.0 | 3.70e-01 | 88.1% | 100.0% |
| 6u5uG07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.57 | 45.0 | 3.76e-01 | 91.0% | 93.2% |
| 2d0oB00 | 3.40.50.10150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › B12-dependent dehydatase associated subunit | 0.57 | 46.0 | 3.98e-01 | 91.0% | 99.1% |
| 1c5kA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 48.0 | 3.29e-01 | 98.5% | 57.1% |
| 4lzkA00 | 2.60.40.3910 | Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein | 0.56 | 38.0 | 2.90e-01 | 71.6% | 86.8% |
| 4nsxA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 40.0 | 2.66e-01 | 79.1% | 97.4% |
| 3u4yA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 45.0 | 2.93e-01 | 91.0% | 80.9% |
| 4azzA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.55 | 48.0 | 3.63e-01 | 98.5% | 81.2% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.54 | 46.0 | 2.96e-01 | 97.0% | 37.9% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 42.0 | 3.44e-01 | 88.1% | 55.6% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 38.0 | 3.11e-01 | 76.1% | 59.7% |
| 1nr0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 45.0 | 2.97e-01 | 95.5% | 65.1% |
| 1af0A01 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.53 | 38.0 | 2.64e-01 | 76.1% | 21.6% |
| 4agiA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.53 | 43.0 | 2.94e-01 | 100.0% | 61.8% |
| 3ow8C00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 44.0 | 2.99e-01 | 100.0% | 43.3% |
| 3s27B01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 38.0 | 3.12e-01 | 77.6% | 60.9% |
| 2pm6D01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 43.0 | 2.98e-01 | 98.5% | 63.6% |
| 3hjhA02 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.52 | 38.0 | 3.54e-01 | 82.1% | 61.6% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 44.0 | 3.41e-01 | 98.5% | 63.0% |
| 1z52A02 | 3.30.412.10 | Alpha Beta › 2-Layer Sandwich › Proaerolysin; Chain A, domain 2 › Proaerolysin, chain A, domain 2 | 0.51 | 39.0 | 3.03e-01 | 88.1% | 64.7% |
| 1k8kC00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 40.0 | 2.69e-01 | 97.0% | 70.1% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.50 | 34.0 | 2.88e-01 | 71.6% | 61.7% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030628 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.72 | 47.0 | 2.75e-01 | 73.1% | 8.8% |
| 3298233 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.71 | 58.0 | 4.42e-01 | 89.6% | 79.4% |
| 3589304 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.71 | 48.0 | 4.62e-01 | 82.1% | 62.7% |
| 3505544 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.70 | 60.0 | 4.00e-01 | 94.0% | 85.8% |
| 3823490 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.69 | 59.0 | 4.26e-01 | 94.0% | 75.1% |
| 3894523 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.68 | 58.0 | 4.16e-01 | 94.0% | 77.9% |
| 3934930 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.68 | 57.0 | 4.10e-01 | 94.0% | 79.0% |
| 4666731 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.67 | 45.0 | 4.49e-01 | 70.1% | 98.6% |
| 3915500 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.66 | 58.0 | 4.19e-01 | 97.0% | 77.8% |
| 4015325 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 50.0 | 3.52e-01 | 82.1% | 52.1% |
| 4928895 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.66 | 52.0 | 3.50e-01 | 88.1% | 32.8% |
| 3412045 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.65 | 57.0 | 4.15e-01 | 97.0% | 76.2% |
| 3363215 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.65 | 55.0 | 4.05e-01 | 92.5% | 83.4% |
| 3842923 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.65 | 57.0 | 4.18e-01 | 97.0% | 81.7% |
| 6641 | 241.11.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR | 0.65 | 44.0 | 3.51e-01 | 79.1% | 36.6% |
| 3856372 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.64 | 56.0 | 4.04e-01 | 97.0% | 77.9% |
| 3935139 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.64 | 47.0 | 3.73e-01 | 79.1% | 42.8% |
| 4480051 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.64 | 56.0 | 4.17e-01 | 98.5% | 62.9% |
| 3777778 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.63 | 47.0 | 3.22e-01 | 80.6% | 25.9% |
| 4259660 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.60 | 41.0 | 2.76e-01 | 70.1% | 17.8% |
| 3283507 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.60 | 40.0 | 3.71e-01 | 70.1% | 54.4% |
| 7390 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.60 | 46.0 | 3.08e-01 | 83.6% | 59.5% |
| 5033616 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.59 | 51.0 | 3.49e-01 | 100.0% | 65.1% |
| 3945385 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.59 | 45.0 | 3.34e-01 | 83.6% | 38.3% |
| 3536906 | 5.1.3.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF | 0.57 | 49.0 | 3.23e-01 | 97.0% | 49.0% |
| 4363783 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 49.0 | 3.01e-01 | 98.5% | 32.3% |
| 3544595 | 5.1.3.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF | 0.57 | 49.0 | 3.23e-01 | 98.5% | 47.5% |
| 4995431 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.56 | 48.0 | 3.09e-01 | 100.0% | 48.9% |
| 3984362 | 1.1.9.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TnpB_IS66 | 0.56 | 40.0 | 3.63e-01 | 77.6% | 94.7% |
| 5012736 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 40.0 | 3.13e-01 | 77.6% | 84.1% |
| 4656410 | 1.1.9.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TnpB_IS66 | 0.56 | 38.0 | 3.56e-01 | 73.1% | 98.9% |
| 3467789 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.56 | 47.0 | 3.11e-01 | 100.0% | 66.8% |
| 3682314 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.55 | 44.0 | 3.04e-01 | 89.6% | 88.8% |
| 5018558 | 2008.1.1.162 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF30170 | 0.55 | 42.0 | 3.53e-01 | 88.1% | 74.8% |
| 4985409 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.55 | 40.0 | 3.23e-01 | 82.1% | 85.8% |
| 3719326 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 45.0 | 2.86e-01 | 95.5% | 46.7% |
| 4888953 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.53 | 44.0 | 2.85e-01 | 100.0% | 43.3% |
| 3877056 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.53 | 47.0 | 3.10e-01 | 100.0% | 52.1% |
| 3507180 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 44.0 | 3.27e-01 | 100.0% | 58.6% |
| 4383876 | 5.1.11.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40, Beta-prop_NOL10_N | 0.52 | 43.0 | 2.84e-01 | 100.0% | 47.0% |
| 4227809 | 3304.1.1.2 ↗ | a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N | 0.52 | 38.0 | 3.01e-01 | 76.1% | 60.7% |
| 3323191 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 34.0 | 3.27e-01 | 76.1% | 57.3% |
| 5047568 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 44.0 | 2.95e-01 | 100.0% | 42.3% |
| 3508297 | 210.1.2.8 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › TANGO2 | 0.52 | 36.0 | 2.53e-01 | 73.1% | 97.9% |
| 3487523 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.52 | 37.0 | 3.30e-01 | 74.6% | 80.0% |
| 3710725 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 43.0 | 2.74e-01 | 100.0% | 65.4% |
| 4489808 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.51 | 37.0 | 3.52e-01 | 82.1% | 62.4% |
| 3266081 | 5.1.3.135 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 | 0.51 | 43.0 | 2.86e-01 | 100.0% | 52.1% |
| 3922650 | 5.1.4.610 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF7165 | 0.51 | 40.0 | 2.74e-01 | 100.0% | 50.1% |
| 3989333 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.50 | 33.0 | 3.45e-01 | 70.1% | 76.7% |
| 3588455 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.50 | 34.0 | 3.39e-01 | 70.1% | 68.6% |
D2
high
residues 91-173
Domain cluster:
rep: MN871446.1__UKS71963.1__KpLz245_0970__00097__D488-572
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 67.0 | 6.50e-01 | 100.0% | 98.9% |
| 4dnyA00 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 61.0 | 5.61e-01 | 100.0% | 86.2% |
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 60.0 | 5.89e-01 | 100.0% | 94.4% |
| 1id2A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.60 | 43.0 | 4.07e-01 | 78.3% | 79.2% |
| 6hbeA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.59 | 47.0 | 4.15e-01 | 91.6% | 84.2% |
| 1xdzA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 45.0 | 3.36e-01 | 96.4% | 63.9% |
| 3urrA00 | 3.40.930.10 | Alpha Beta › 3-Layer(aba) Sandwich › Mannitol-specific EII; Chain A › Mannitol-specific EII; Chain A | 0.54 | 41.0 | 3.41e-01 | 83.1% | 73.7% |
| 1xizB00 | 3.40.930.10 | Alpha Beta › 3-Layer(aba) Sandwich › Mannitol-specific EII; Chain A › Mannitol-specific EII; Chain A | 0.53 | 41.0 | 3.40e-01 | 84.3% | 74.4% |
| 1fwxA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.52 | 44.0 | 3.95e-01 | 96.4% | 73.6% |
| 1gff200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 42.0 | 3.49e-01 | 98.8% | 74.0% |
| 3f8tA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 39.0 | 3.97e-01 | 81.9% | 90.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2581337 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.75 | 67.0 | 6.48e-01 | 100.0% | 97.8% |
| 3942383 | 520.2.1.0 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE | 0.69 | 61.0 | 6.02e-01 | 100.0% | 94.4% |
| 185692 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.69 | 61.0 | 5.61e-01 | 100.0% | 86.2% |
| 2581340 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.68 | 61.0 | 6.02e-01 | 100.0% | 97.7% |
| 4927885 | 3156.1.1.3 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Copper-bind | 0.60 | 44.0 | 4.09e-01 | 78.3% | 94.5% |
| 169884 | 3156.1.1.3 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Copper-bind | 0.60 | 43.0 | 4.07e-01 | 78.3% | 79.2% |
| 3603956 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.58 | 44.0 | 3.21e-01 | 81.9% | 51.9% |
| 3635689 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.57 | 42.0 | 2.81e-01 | 78.3% | 88.9% |
| 3989806 | 311.1.1.1 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › PTS_EIIA_2 | 0.55 | 43.0 | 3.49e-01 | 83.1% | 76.3% |
| 5011495 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 41.0 | 3.16e-01 | 79.5% | 46.5% |
| 3164523 | 311.1.1.1 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › PTS_EIIA_2 | 0.53 | 41.0 | 3.37e-01 | 83.1% | 74.8% |
| 4446473 | 311.1.1.1 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › PTS_EIIA_2 | 0.53 | 41.0 | 3.43e-01 | 83.1% | 77.2% |
| 4007456 | 311.1.1.1 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › PTS_EIIA_2 | 0.52 | 40.0 | 3.34e-01 | 83.1% | 74.0% |
| 4390756 | 311.1.1.1 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › PTS_EIIA_2 | 0.52 | 39.0 | 3.21e-01 | 83.1% | 70.3% |
| 3942007 | 311.1.1.1 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › PTS_EIIA_2 | 0.51 | 40.0 | 3.29e-01 | 83.1% | 76.0% |
D3
medium
residues 183-240
Domain cluster:
rep: AY328852.1__AAQ96491.1__X__00024__D88-161
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07484.18 best | Collar | 81.3 | 5.30e-23 | 100.0% | 100.0% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xgfA01 | 3.90.1340.10 | Alpha Beta › Alpha-Beta Complex › heat- and protease-stable fragment of the bacteriophage t4 short fibre, domain 3 › Phage tail collar domain | 0.84 | 60.0 | 6.08e-01 | 91.4% | 76.8% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1839976 | 877.1.1.3 ↗ | a+b duplicates or obligate multimers › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › Collar,S_tail_recep_bd | 0.88 | 80.0 | 5.35e-01 | 100.0% | 28.8% |
| 3981712 | 877.1.1.2 ↗ | a+b duplicates or obligate multimers › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › Collar | 0.87 | 67.0 | 4.92e-01 | 100.0% | 33.1% |
| 4784856 | 877.1.1.2 ↗ | a+b duplicates or obligate multimers › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › Collar | 0.87 | 73.0 | 6.93e-01 | 93.1% | 77.9% |