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MN988552.1__QIG76138.1__EVC24_117__00117
Bact-VirMN988552.1__QIG76138.1__EVC24_117__00117
Identity
- Accession:
- MN988552 ↗
- Kingdom:
- phage
Quality
74.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-56
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.71 | 52.0 | 4.10e-01 | 76.8% | 42.9% |
| 6jzaA00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.71 | 44.0 | 3.90e-01 | 80.4% | 43.2% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 61.0 | 4.93e-01 | 100.0% | 56.6% |
| 3zbqA00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.67 | 46.0 | 2.85e-01 | 71.4% | 30.8% |
| 1f02T00 | 4.10.820.10 | Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain | 0.66 | 46.0 | 4.43e-01 | 75.0% | 74.2% |
| 2wdoA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.63 | 46.0 | 3.53e-01 | 76.8% | 65.9% |
| 3tm4A01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.63 | 40.0 | 2.74e-01 | 71.4% | 19.0% |
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.61 | 45.0 | 3.23e-01 | 83.9% | 29.1% |
| 5x8tT00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.61 | 43.0 | 3.22e-01 | 75.0% | 50.7% |
| 1qr0A02 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.59 | 42.0 | 3.47e-01 | 75.0% | 68.9% |
| 6ks6G01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.59 | 43.0 | 2.79e-01 | 78.6% | 45.0% |
| 4nzrM01 | 3.30.1370.200 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.58 | 44.0 | 3.83e-01 | 80.4% | 78.6% |
| 3p9dG01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.58 | 43.0 | 2.83e-01 | 80.4% | 46.6% |
| 1c7uA01 | 3.40.1810.10 | Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box | 0.58 | 45.0 | 4.32e-01 | 82.1% | 74.6% |
| 4qxdA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.55 | 46.0 | 3.27e-01 | 89.3% | 73.4% |
| 2ab5B01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 37.0 | 2.91e-01 | 73.2% | 89.1% |
| 2af6A01 | 3.30.70.3180 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 36.0 | 2.76e-01 | 71.4% | 59.5% |
| 2hlyA00 | 3.10.550.10 | Alpha Beta › Roll › Atu2299-like › Hypothetical protein Atu2299 | 0.51 | 40.0 | 2.78e-01 | 87.5% | 41.0% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3651664 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.85 | 48.0 | 2.81e-01 | 83.9% | 8.4% |
| 3517280 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.84 | 57.0 | 3.40e-01 | 71.4% | 14.2% |
| 4025072 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.82 | 62.0 | 4.81e-01 | 82.1% | 39.1% |
| 3338842 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.82 | 47.0 | 2.80e-01 | 83.9% | 8.8% |
| 3218345 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.80 | 67.0 | 4.04e-01 | 89.3% | 16.9% |
| 4087557 | 7581.1.1.1 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N | 0.80 | 41.0 | 2.48e-01 | 85.7% | 9.8% |
| 3321176 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.79 | 67.0 | 3.90e-01 | 91.1% | 12.0% |
| 3716174 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.79 | 62.0 | 4.93e-01 | 85.7% | 44.5% |
| 3788706 | 109.4.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N | 0.78 | 51.0 | 2.86e-01 | 85.7% | 5.9% |
| 3925273 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.78 | 65.0 | 4.94e-01 | 89.3% | 73.3% |
| 3908432 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.77 | 45.0 | 2.67e-01 | 73.2% | 8.2% |
| 3783976 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.72 | 66.0 | 5.56e-01 | 100.0% | 68.9% |
| 3923603 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.72 | 60.0 | 3.65e-01 | 100.0% | 15.9% |
| 3211040 | 910.1.1.1 ↗ | few secondary structure elements › Cysteine-rich DNA binding domain, (DM domain) › Cysteine-rich DNA binding domain, (DM domain) › Cysteine-rich DNA binding domain, (DM domain) › DM | 0.72 | 49.0 | 4.45e-01 | 71.4% | 86.5% |
| 3276327 | 593.1.1.0 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like | 0.71 | 63.0 | 4.28e-01 | 100.0% | 77.5% |
| 3946506 | 7011.1.1.6 ↗ | alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › Wzy_C | 0.71 | 55.0 | 3.29e-01 | 83.9% | 12.1% |
| 3687315 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 63.0 | 4.17e-01 | 100.0% | 28.4% |
| 3574593 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.71 | 62.0 | 4.10e-01 | 98.2% | 28.3% |
| 2526434 | 389.1.1.12 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › FOLN | 0.70 | 43.0 | 5.14e-01 | 78.6% | 100.0% |
| 338973 | 4970.1.1.5 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › vRNAP_dom_2 | 0.70 | 54.0 | 4.22e-01 | 83.9% | 48.3% |
| 3800293 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.69 | 49.0 | 4.14e-01 | 75.0% | 54.8% |
| 4965179 | 5040.1.1.0 ↗ | extended segments › Cytochrome c oxidase subunit II-like, transmembrane region › Cytochrome c oxidase subunit II-like, transmembrane region › Cytochrome c oxidase subunit II-like, transmembrane region | 0.67 | 56.0 | 5.03e-01 | 89.3% | 68.0% |
| 4140813 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.66 | 61.0 | 3.99e-01 | 100.0% | 37.7% |
| 4441223 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.59 | 42.0 | 3.14e-01 | 76.8% | 47.3% |
| 4014690 | 7581.1.1.1 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N | 0.59 | 44.0 | 2.82e-01 | 80.4% | 35.4% |
| 3583221 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 42.0 | 3.03e-01 | 78.6% | 30.9% |
| 5078830 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.57 | 46.0 | 3.00e-01 | 87.5% | 73.6% |
| 3242557 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.54 | 39.0 | 2.88e-01 | 76.8% | 78.0% |
| 4035697 | 5054.1.1.7 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › KdpA | 0.52 | 43.0 | 3.40e-01 | 94.6% | 65.8% |
| 3279985 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 37.0 | 2.82e-01 | 80.4% | 56.7% |