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MN988556.1__QIG76674.1__EVC28_050__00050

Bact-Vir

MN988556.1__QIG76674.1__EVC28_050__00050

Identity

Accession:
MN988556 ↗
Kingdom:
phage

Quality

73.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-82
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mb7A02 1.10.8.50 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.80 56.0 3.89e-01 73.5% 24.5%
4oycB00 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.74 61.0 5.03e-01 91.8% 57.3%
2xssA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.72 55.0 3.86e-01 83.7% 29.5%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.69 52.0 3.31e-01 91.8% 16.7%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 4.18e-01 83.7% 49.5%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.67 55.0 4.31e-01 91.8% 44.2%
3venA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.66 59.0 3.80e-01 100.0% 66.7%
3weeB03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.66 41.0 3.09e-01 81.6% 26.1%
8dy9I01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.66 46.0 3.10e-01 75.5% 20.4%
6lmjB00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.65 50.0 3.98e-01 100.0% 40.8%
3upsA00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.65 49.0 3.88e-01 83.7% 38.0%
2xmjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 45.0 4.19e-01 77.6% 57.1%
5flmA02 3.30.1360.140 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.65 45.0 3.32e-01 73.5% 28.7%
2c7yA00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.65 54.0 3.21e-01 93.9% 48.3%
1i5eA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.64 55.0 3.64e-01 95.9% 76.4%
2qrdE01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.63 48.0 3.27e-01 83.7% 98.9%
2g0iA00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.62 53.0 4.09e-01 95.9% 63.1%
2itmB02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 54.0 3.50e-01 100.0% 44.4%
3emiA00 3.90.1780.10 Alpha Beta › Alpha-Beta Complex › Trimeric adhesin › Trimeric adhesin 0.62 38.0 2.95e-01 83.7% 27.3%
3pjvD01 3.30.110.200 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.61 53.0 4.55e-01 98.0% 80.8%
6eudA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 42.0 2.97e-01 73.5% 76.5%
5o6uB00 3.30.70.2540 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-associated endoribonuclease Cas6/Csy4 0.61 47.0 3.17e-01 83.7% 37.9%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.60 47.0 4.14e-01 83.7% 94.3%
3hnoA01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 45.0 3.07e-01 91.8% 21.3%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.59 46.0 4.10e-01 87.8% 90.4%
2oo4A02 3.30.70.3310 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 43.0 3.47e-01 81.6% 47.7%
2wpvE00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 51.0 3.18e-01 100.0% 39.3%
3pg6B00 3.30.390.130 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.58 44.0 3.26e-01 81.6% 78.4%
1k8kA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.57 42.0 3.46e-01 79.6% 80.4%
2hqyA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 42.0 3.07e-01 81.6% 45.4%
4mt1A07 3.30.70.1440 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.55 45.0 3.69e-01 98.0% 47.1%
1owfA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.55 47.0 3.83e-01 98.0% 69.8%
7w3rB01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.55 40.0 2.51e-01 79.6% 67.7%
2iz4A02 2.20.25.590 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.55 34.0 3.56e-01 79.6% 66.7%
1s7mA03 2.20.25.140 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.55 34.0 3.79e-01 75.5% 100.0%
4g1uD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 42.0 2.65e-01 85.7% 16.0%
2if1A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.54 44.0 3.36e-01 95.9% 65.9%
3obaA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 46.0 2.84e-01 100.0% 18.9%
7ejoB01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.53 40.0 3.35e-01 81.6% 48.2%
2e55A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 44.0 3.04e-01 98.0% 63.0%
1ka8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.45e-01 89.8% 51.0%
4c1sA00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.53 46.0 2.73e-01 98.0% 19.5%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 35.0 3.37e-01 85.7% 60.3%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 36.0 3.11e-01 77.6% 43.4%
1fi8C00 2.60.40.550 Mainly Beta › Sandwich › Immunoglobulin-like › Ecotin 0.51 32.0 2.81e-01 77.6% 37.2%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3891351 5001.1.1.5 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.83 58.0 3.50e-01 73.5% 12.8%
3289385 3433.1.2.1 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer 0.79 51.0 5.14e-01 75.5% 66.0%
5063524 2008.1.1.4 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 0.78 53.0 3.64e-01 75.5% 21.3%
2323881 3433.1.2.1 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer 0.77 53.0 5.16e-01 81.6% 64.8%
4670438 3433.1.2.1 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer 0.76 60.0 5.63e-01 89.8% 71.2%
3252212 283.2.1.0 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.75 65.0 5.68e-01 98.0% 65.3%
4446761 3433.1.2.0 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain 0.75 53.0 5.18e-01 79.6% 67.3%
3609340 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.74 52.0 4.16e-01 73.5% 40.0%
3947866 3433.1.2.1 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer 0.74 50.0 5.03e-01 71.4% 70.0%
3270655 5001.1.1.5 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.74 59.0 3.68e-01 87.8% 63.4%
4937023 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 51.0 4.09e-01 81.6% 37.0%
3213842 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.73 56.0 3.41e-01 81.6% 33.0%
3925962 5001.1.1.44 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv 0.73 58.0 3.52e-01 87.8% 58.3%
3934910 5001.1.1.44 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv 0.72 56.0 3.57e-01 83.7% 22.2%
4980789 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.72 61.0 3.56e-01 95.9% 37.1%
3216326 5001.1.1.66 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.72 55.0 3.38e-01 85.7% 16.4%
4880209 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.71 56.0 3.69e-01 85.7% 25.7%
3206607 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.71 56.0 4.95e-01 87.8% 60.0%
4500042 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.71 58.0 3.41e-01 100.0% 40.0%
3931457 5001.1.1.44 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv 0.70 57.0 3.53e-01 91.8% 67.1%
3632364 603.1.1.120 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF846 0.69 61.0 4.23e-01 100.0% 70.3%
5071449 873.1.1.1 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.69 55.0 3.85e-01 91.8% 30.0%
3777742 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.68 56.0 3.34e-01 100.0% 31.0%
3521467 3016.1.1.21 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › PDXDC1-like_cen 0.68 61.0 4.93e-01 100.0% 66.7%
3497680 5054.1.1.63 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, YVC1_C 0.68 57.0 3.38e-01 91.8% 30.3%
4026919 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.66 47.0 3.60e-01 73.5% 34.5%
3004432 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.66 57.0 4.56e-01 98.0% 73.7%
3934035 5001.1.1.44 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv 0.66 55.0 3.44e-01 95.9% 71.4%
3168821 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.65 55.0 3.36e-01 100.0% 22.3%
4899007 3121.1.1.0 a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain 0.64 54.0 4.87e-01 100.0% 72.2%
3421312 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.64 57.0 5.13e-01 100.0% 80.0%
3983704 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.64 50.0 3.94e-01 85.7% 73.8%
3693835 601.1.1.90 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF3433 0.64 55.0 3.76e-01 95.9% 84.7%
3686379 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 48.0 4.37e-01 85.7% 60.0%
4817079 327.11.2.5 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_8 0.63 46.0 3.96e-01 100.0% 47.6%
3818705 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.63 56.0 4.79e-01 100.0% 71.2%
4200887 3070.1.1.17 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › YQBQ 0.61 47.0 3.96e-01 87.8% 95.6%
None 0.60 49.0 3.11e-01 89.8% 96.8%
4996248 331.19.1.0 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.60 43.0 3.57e-01 93.9% 42.2%
4989946 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.60 54.0 4.13e-01 100.0% 79.1%
3710982 7581.1.1.1 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N 0.59 46.0 2.95e-01 91.8% 29.8%
1278602 223.3.1.1 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.58 44.0 4.20e-01 85.7% 98.3%
3176554 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.58 44.0 2.81e-01 85.7% 27.6%
4880634 223.3.1.1 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.58 44.0 4.23e-01 85.7% 96.6%
4940054 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 49.0 3.94e-01 93.9% 48.4%
5044501 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 45.0 3.54e-01 89.8% 71.8%
3610526 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.57 47.0 3.10e-01 100.0% 28.5%
4625543 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.56 44.0 2.77e-01 85.7% 21.6%
4231372 4.1.1.307 beta barrels › SH3 › SH3 › SH3 › PF26132 0.55 43.0 3.85e-01 93.9% 60.0%
4153209 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.55 44.0 2.78e-01 85.7% 21.6%
3604405 2003.1.5.165 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11, Methyltransf_23 0.55 41.0 2.73e-01 81.6% 48.3%
3934573 2485.1.1.3 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Glutaredoxin 0.55 39.0 3.04e-01 79.6% 49.6%
5023509 263.1.1.0 a+b three layers › SRF-like › SRF-like › SRF-like 0.54 38.0 3.92e-01 79.6% 100.0%
3786028 101.1.2.86 alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 0.54 48.0 3.39e-01 100.0% 66.2%
3577414 2485.1.1.40 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_3 0.51 37.0 2.78e-01 83.7% 44.7%