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MN988557.1__QIG76714.1__EVC29_013__00012
Bact-VirMN988557.1__QIG76714.1__EVC29_013__00012
Identity
- Accession:
- MN988557 ↗
- Kingdom:
- phage
Quality
87.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-22_86-173
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fm4B02 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 48.0 | 4.86e-01 | 100.0% | 81.2% |
| 1v29B02 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 47.0 | 4.88e-01 | 100.0% | 83.5% |
| 3vygD00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 48.0 | 4.58e-01 | 100.0% | 71.4% |
| 1xovA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 35.0 | 4.13e-01 | 99.0% | 90.9% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 48.0 | 4.45e-01 | 100.0% | 93.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3530890 | 2004.1.1.402 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CABIT | 0.55 | 37.0 | 4.01e-01 | 100.0% | 83.0% |
| 3580020 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.52 | 44.0 | 3.65e-01 | 96.2% | 81.5% |
| 4193090 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 39.0 | 3.95e-01 | 100.0% | 81.9% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.50 | 44.0 | 4.30e-01 | 97.1% | 98.3% |
D2
high
residues 26-79
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.69 | 49.0 | 3.68e-01 | 100.0% | 29.8% |
| 2ktmA00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.58 | 47.0 | 4.48e-01 | 100.0% | 83.8% |
| 4nxtA01 | 1.10.1410.40 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.56 | 45.0 | 3.45e-01 | 96.3% | 44.8% |
| 1vkrA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 41.0 | 3.44e-01 | 88.9% | 74.2% |
| 4ewcA03 | 1.20.120.1660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.51 | 43.0 | 3.90e-01 | 94.4% | 86.7% |
| 4ielA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 38.0 | 2.92e-01 | 100.0% | 37.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4432219 | 604.39.1.5 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF_trnsprt | 0.64 | 51.0 | 3.61e-01 | 88.9% | 51.2% |
| 3470318 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.57 | 45.0 | 2.71e-01 | 92.6% | 38.3% |
| 3259751 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.53 | 41.0 | 3.79e-01 | 94.4% | 66.3% |