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MN988557.1__QIG76727.1__EVC29_026__00025
Bact-VirMN988557.1__QIG76727.1__EVC29_026__00025
Identity
- Accession:
- MN988557 ↗
- Kingdom:
- phage
Quality
90.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-86
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.65 | 39.0 | 3.72e-01 | 95.2% | 50.5% |
| 5o46A00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 49.0 | 4.38e-01 | 81.9% | 92.1% |
| 3fsdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 44.0 | 3.89e-01 | 77.1% | 97.5% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 43.0 | 3.63e-01 | 79.5% | 45.3% |
| 5hy7B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 51.0 | 3.31e-01 | 98.8% | 51.2% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.58 | 41.0 | 3.82e-01 | 75.9% | 58.8% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.58 | 48.0 | 3.95e-01 | 94.0% | 91.5% |
| 3mg1B02 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 45.0 | 3.97e-01 | 85.5% | 98.4% |
| 1vmeB01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 47.0 | 3.44e-01 | 94.0% | 93.6% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 42.0 | 4.39e-01 | 88.0% | 89.2% |
| 3bb9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 41.0 | 3.59e-01 | 77.1% | 100.0% |
| 1hn0A03 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 50.0 | 3.47e-01 | 100.0% | 92.5% |
| 3f7xA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 41.0 | 3.55e-01 | 78.3% | 90.2% |
| 3n91A02 | 2.40.128.420 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 41.0 | 3.52e-01 | 78.3% | 85.3% |
| 3e1eC00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 43.0 | 3.60e-01 | 81.9% | 78.7% |
| 2xu8A00 | 3.90.70.190 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Domain of unknown function (DUF5086) | 0.56 | 43.0 | 3.92e-01 | 88.0% | 61.2% |
| 2dayA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.55 | 47.0 | 4.37e-01 | 100.0% | 85.0% |
| 2b5iB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 3.96e-01 | 78.3% | 87.2% |
| 7jvhC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 48.0 | 3.25e-01 | 100.0% | 82.6% |
| 3hzpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 42.0 | 3.60e-01 | 80.7% | 96.1% |
| 7bwcA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 48.0 | 3.28e-01 | 100.0% | 46.4% |
| 4fekB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 43.0 | 3.19e-01 | 92.8% | 92.3% |
| 1k3eB02 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 42.0 | 3.95e-01 | 86.7% | 82.9% |
| 8adlB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 47.0 | 3.18e-01 | 98.8% | 37.1% |
| 1lshA04 | 2.20.80.10 | Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex, chain A, domain 4 › Lipovitellin-phosvitin complex, chain A, domain 4 | 0.53 | 45.0 | 3.22e-01 | 94.0% | 72.1% |
| 5swiD01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 46.0 | 3.35e-01 | 100.0% | 89.8% |
| 3vrdB03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.53 | 36.0 | 3.84e-01 | 72.3% | 85.1% |
| 3eyrA00 | 3.15.10.40 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Uncharacterised protein PF07273 family, DUF1439 | 0.52 | 39.0 | 3.12e-01 | 79.5% | 56.8% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 44.0 | 4.05e-01 | 100.0% | 71.3% |
| 2r4iA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 39.0 | 3.45e-01 | 79.5% | 96.7% |
| 3rmhB00 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 39.0 | 3.35e-01 | 80.7% | 91.7% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 36.0 | 3.18e-01 | 78.3% | 49.6% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3764790 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.65 | 47.0 | 4.50e-01 | 75.9% | 71.6% |
| 3283564 | 881.1.1.26 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF7373 | 0.64 | 45.0 | 3.40e-01 | 95.2% | 30.5% |
| 3960415 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.63 | 44.0 | 3.93e-01 | 74.7% | 50.8% |
| 3208809 | 9.2.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Vac_ImportDeg | 0.62 | 46.0 | 3.31e-01 | 79.5% | 53.1% |
| 3934735 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.62 | 48.0 | 4.48e-01 | 81.9% | 97.0% |
| 3423970 | 243.3.1.12 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SQAPI | 0.61 | 48.0 | 4.22e-01 | 83.1% | 89.2% |
| 3925421 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 49.0 | 4.60e-01 | 85.5% | 97.0% |
| 170212 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.60 | 44.0 | 3.89e-01 | 77.1% | 97.5% |
| 5042182 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.60 | 52.0 | 4.93e-01 | 100.0% | 91.0% |
| 3596328 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.60 | 52.0 | 4.14e-01 | 97.6% | 84.7% |
| 3226411 | 243.1.1.82 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26529 | 0.59 | 44.0 | 3.67e-01 | 80.7% | 98.0% |
| 3433417 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.58 | 49.0 | 4.56e-01 | 91.6% | 99.0% |
| 3736823 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.58 | 46.0 | 3.01e-01 | 88.0% | 95.2% |
| 3933126 | 5.1.11.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A | 0.58 | 51.0 | 3.22e-01 | 98.8% | 29.7% |
| 3740871 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.57 | 50.0 | 3.20e-01 | 98.8% | 50.4% |
| 3999127 | 109.21.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 | 0.57 | 50.0 | 2.92e-01 | 96.4% | 20.6% |
| 3359021 | 5.1.5.86 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Kelch_1 | 0.57 | 49.0 | 3.33e-01 | 98.8% | 41.0% |
| 3970236 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.57 | 43.0 | 3.61e-01 | 79.5% | 91.4% |
| 3352484 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.57 | 48.0 | 3.23e-01 | 98.8% | 37.1% |
| 5049764 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 38.0 | 3.44e-01 | 84.3% | 49.6% |
| 3433173 | 5.1.5.86 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Kelch_1 | 0.56 | 49.0 | 3.25e-01 | 98.8% | 42.9% |
| 3280539 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.56 | 42.0 | 3.68e-01 | 80.7% | 91.5% |
| 3653889 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 49.0 | 3.30e-01 | 100.0% | 40.9% |
| 3168116 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.56 | 41.0 | 2.74e-01 | 79.5% | 66.0% |
| 4029737 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 49.0 | 2.87e-01 | 100.0% | 25.9% |
| 3651373 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 48.0 | 3.11e-01 | 97.6% | 48.1% |
| 4283272 | 243.1.1.1 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B | 0.55 | 41.0 | 3.23e-01 | 79.5% | 90.6% |
| 3221443 | 5.1.4.61 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N | 0.55 | 48.0 | 3.20e-01 | 98.8% | 38.3% |
| 3663455 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.55 | 46.0 | 3.20e-01 | 95.2% | 53.4% |
| 3498837 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.54 | 48.0 | 2.81e-01 | 97.6% | 33.4% |
| 3970009 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.54 | 39.0 | 3.15e-01 | 77.1% | 83.4% |
| 3708710 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.54 | 47.0 | 2.74e-01 | 97.6% | 25.0% |
| 3300715 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.54 | 47.0 | 3.59e-01 | 96.4% | 64.2% |
| 4081842 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.54 | 45.0 | 3.43e-01 | 100.0% | 37.2% |
| 3840630 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.54 | 47.0 | 3.18e-01 | 98.8% | 39.4% |
| 4014419 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.53 | 42.0 | 2.77e-01 | 88.0% | 40.0% |
| 4453707 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 46.0 | 3.48e-01 | 100.0% | 38.6% |
| 3499475 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 44.0 | 3.23e-01 | 96.4% | 81.0% |
| 3938876 | 220.1.1.159 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_met_RdRP | 0.53 | 37.0 | 2.93e-01 | 73.5% | 73.1% |
| 5055744 | 5.1.3.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 | 0.53 | 47.0 | 3.10e-01 | 100.0% | 62.0% |
| 3966460 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.53 | 39.0 | 2.67e-01 | 75.9% | 49.2% |
| 137905 | 883.1.1.5 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › DUF1439 | 0.53 | 39.0 | 3.10e-01 | 79.5% | 56.1% |
| 3704832 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.52 | 44.0 | 2.85e-01 | 94.0% | 46.4% |
| 4997955 | 247.1.1.17 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › ODP | 0.52 | 44.0 | 3.18e-01 | 96.4% | 93.7% |
| 3710799 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 43.0 | 2.75e-01 | 96.4% | 41.7% |
| 3196407 | 7026.1.1.5 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD | 0.51 | 38.0 | 2.79e-01 | 81.9% | 60.4% |
| 5038486 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 43.0 | 3.29e-01 | 95.2% | 50.0% |
| 3218632 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.50 | 37.0 | 3.54e-01 | 77.1% | 72.3% |
| 3927742 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.50 | 42.0 | 2.96e-01 | 96.4% | 43.1% |