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MN988558.1__QIG76858.1__EVC30_029__00029
Bact-VirMN988558.1__QIG76858.1__EVC30_029__00029
Identity
- Accession:
- MN988558 ↗
- Kingdom:
- phage
Quality
57.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 51-146
Domain cluster:
rep: NC_042082.1__YP_009619955.1__FDJ07_gp060__00060__D30-47_65-121
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eqvA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.61 | 57.0 | 5.03e-01 | 100.0% | 75.9% |
| 3ue3A02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.60 | 55.0 | 4.78e-01 | 100.0% | 78.2% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.58 | 41.0 | 3.67e-01 | 79.2% | 51.9% |
| 5ja2A01 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.57 | 40.0 | 3.01e-01 | 75.0% | 83.5% |
| 3p9vA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 47.0 | 4.02e-01 | 92.7% | 81.6% |
| 3gcfA01 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.56 | 44.0 | 3.23e-01 | 84.4% | 81.5% |
| 5l10B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.56 | 49.0 | 4.12e-01 | 100.0% | 77.1% |
| 6cc0A01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.56 | 50.0 | 4.18e-01 | 100.0% | 77.4% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 37.0 | 3.63e-01 | 94.8% | 63.0% |
| 2zylA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.54 | 42.0 | 3.30e-01 | 100.0% | 37.8% |
| 2le1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 45.0 | 3.96e-01 | 94.8% | 88.1% |
| 7r3eB02 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.54 | 47.0 | 4.01e-01 | 100.0% | 77.9% |
| 4xrtA02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 43.0 | 3.70e-01 | 100.0% | 54.4% |
| 3rt0C00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 45.0 | 3.75e-01 | 94.8% | 80.2% |
| 5u1xA02 | 2.60.490.10 | Mainly Beta › Sandwich › atp-gated p2x4 ion channel fold › atp-gated p2x4 ion channel domain | 0.52 | 37.0 | 2.76e-01 | 74.0% | 78.2% |
| 3gtyX02 | 3.10.50.30 | Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain | 0.52 | 35.0 | 3.78e-01 | 82.3% | 79.8% |
| 3gkeA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.52 | 44.0 | 3.47e-01 | 94.8% | 74.8% |
| 1em2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 44.0 | 3.44e-01 | 94.8% | 70.6% |
| 8es5A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 45.0 | 3.96e-01 | 94.8% | 87.0% |
| 2gmhA02 | 3.30.9.90 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › | 0.50 | 39.0 | 3.09e-01 | 83.3% | 60.1% |
| 4l3nA02 | 2.20.210.30 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › | 0.50 | 32.0 | 3.78e-01 | 70.8% | 94.0% |
| 1t17A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 42.0 | 3.73e-01 | 94.8% | 91.2% |
| 4k15A00 | 2.60.40.3860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 36.0 | 3.27e-01 | 100.0% | 52.9% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3782284 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 60.0 | 4.61e-01 | 100.0% | 52.9% |
| 3322115 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.63 | 44.0 | 4.18e-01 | 81.2% | 60.9% |
| 3711910 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 55.0 | 4.66e-01 | 100.0% | 75.0% |
| 5053601 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 53.0 | 4.61e-01 | 100.0% | 74.0% |
| 3559721 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.58 | 47.0 | 3.89e-01 | 100.0% | 46.5% |
| 3229636 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.58 | 47.0 | 3.87e-01 | 100.0% | 45.9% |
| 3774553 | 223.2.1.22 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin | 0.57 | 53.0 | 3.80e-01 | 100.0% | 51.5% |
| 3449212 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.57 | 54.0 | 3.93e-01 | 100.0% | 90.6% |
| 3784589 | 223.2.1.19 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 | 0.57 | 50.0 | 4.22e-01 | 100.0% | 79.4% |
| 3175912 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.57 | 48.0 | 3.80e-01 | 92.7% | 91.5% |
| 3511437 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.57 | 37.0 | 3.69e-01 | 71.9% | 64.0% |
| 3255874 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.56 | 47.0 | 3.76e-01 | 92.7% | 76.9% |
| 3550298 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.56 | 44.0 | 3.70e-01 | 100.0% | 47.2% |
| 3484999 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.55 | 48.0 | 4.12e-01 | 94.8% | 91.9% |
| 3278071 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.55 | 47.0 | 4.08e-01 | 94.8% | 90.7% |
| 3953711 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.54 | 46.0 | 4.07e-01 | 94.8% | 93.1% |
| 5065450 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 47.0 | 4.11e-01 | 100.0% | 76.8% |
| 3648327 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.54 | 46.0 | 4.10e-01 | 94.8% | 90.7% |
| 398027 | 331.3.1.15 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3809 | 0.54 | 42.0 | 3.72e-01 | 100.0% | 54.7% |
| 3782223 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.54 | 45.0 | 3.47e-01 | 92.7% | 65.3% |
| 3956791 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.54 | 45.0 | 3.88e-01 | 92.7% | 86.3% |
| 143699 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.54 | 45.0 | 4.03e-01 | 94.8% | 93.0% |
| 3639154 | 331.4.1.27 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › VASt | 0.53 | 45.0 | 3.54e-01 | 92.7% | 60.5% |
| 3959863 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 46.0 | 3.99e-01 | 94.8% | 93.1% |
| 3785769 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.53 | 44.0 | 3.88e-01 | 94.8% | 94.0% |
| 4101946 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.53 | 42.0 | 3.58e-01 | 100.0% | 50.9% |
| 5049880 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.53 | 44.0 | 3.86e-01 | 94.8% | 90.3% |
| 4526286 | 331.3.1.19 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C | 0.52 | 44.0 | 3.40e-01 | 94.8% | 71.3% |
| 5004059 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.52 | 44.0 | 3.89e-01 | 95.8% | 93.8% |
| 3278805 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.51 | 44.0 | 3.86e-01 | 94.8% | 92.4% |
| 3235095 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.51 | 43.0 | 3.35e-01 | 94.8% | 65.2% |
| 4883183 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.51 | 47.0 | 3.89e-01 | 100.0% | 97.0% |
| 3622273 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.51 | 43.0 | 3.33e-01 | 94.8% | 62.6% |
| 3783096 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.51 | 43.0 | 3.66e-01 | 94.8% | 80.6% |
| 4929336 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.51 | 42.0 | 3.70e-01 | 94.8% | 85.8% |
| 3968365 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 36.0 | 3.06e-01 | 85.4% | 43.6% |
| 3651121 | 331.3.1.31 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1990 | 0.50 | 44.0 | 3.50e-01 | 100.0% | 90.0% |