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MN988558.1__QIG76864.1__EVC30_035__00035

Bact-Vir

MN988558.1__QIG76864.1__EVC30_035__00035

Identity

Accession:
MN988558 ↗
Kingdom:
phage

Quality

71.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhizobium_phage_RHph_Y1_11

TaxID: 2509770

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 170-244
PDB
Domain cluster: rep: KY022433.1__APD18909.1__X__00104__D1-71
D2 medium residues 245-298
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6wctD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 45.0 3.37e-01 88.9% 77.6%
2fj0A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 46.0 2.65e-01 96.3% 57.4%
3tahA02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 36.0 3.18e-01 77.8% 47.7%
3akjA02 1.10.1070.20 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › 0.50 37.0 2.66e-01 88.9% 30.3%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3952891 101.1.1.282 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF222 0.80 66.0 4.97e-01 90.7% 44.8%
5042934 3317.1.1.0 ↗ alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain 0.66 52.0 4.75e-01 90.7% 90.7%
3209368 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.64 51.0 3.14e-01 90.7% 18.4%
3682205 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 47.0 3.56e-01 90.7% 53.8%
4944329 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 34.0 3.55e-01 87.0% 62.0%
5036922 101.1.2.652 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.59 43.0 3.42e-01 83.3% 87.7%
3693234 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.51 36.0 3.26e-01 88.9% 54.7%