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MN988561.1__QIG77885.1__EVB64_319__00298
Bact-VirMN988561.1__QIG77885.1__EVB64_319__00298
Identity
- Accession:
- MN988561 ↗
- Kingdom:
- phage
Quality
90.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Kleczkowskaviridae›
Cuauhnahuacvirus›
Rhizobium_phage_RHph_TM61
TaxID: 2509572
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-122
Domain cluster:
rep: KT624200.1__AMM44889.1__SP15_090__00091__D1-123
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12917.14 best | YfbR-like | 41.9 | 1.30e-10 | 91.8% | 48.4% |
| PF13023.13 | HD_3 | 26.5 | 7.70e-06 | 88.5% | 42.4% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xx7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.83 | 73.0 | 6.38e-01 | 100.0% | 65.1% |
| 5tk8A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.81 | 76.0 | 6.37e-01 | 99.2% | 65.4% |
| 3mzoB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.80 | 76.0 | 6.19e-01 | 100.0% | 58.6% |
| 4dmbB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.80 | 74.0 | 6.20e-01 | 100.0% | 62.1% |
| 2paqA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.79 | 74.0 | 6.41e-01 | 100.0% | 68.4% |
| 1ynbA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.76 | 66.0 | 5.83e-01 | 100.0% | 67.1% |
| 3kh1A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.75 | 67.0 | 5.66e-01 | 100.0% | 59.5% |
| 2gz4A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.68 | 63.0 | 5.23e-01 | 99.2% | 60.0% |
| 6oi7A01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.63 | 57.0 | 4.81e-01 | 97.5% | 80.6% |
| 3bg2A01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.62 | 52.0 | 4.52e-01 | 96.7% | 59.3% |
| 2kmfA01 | 1.20.58.810 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 | 0.57 | 33.0 | 3.57e-01 | 91.0% | 66.7% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 31.0 | 3.83e-01 | 88.5% | 88.7% |
| 2q83A02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.55 | 43.0 | 3.57e-01 | 85.2% | 70.8% |
| 1u7gA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.55 | 45.0 | 3.26e-01 | 91.0% | 83.3% |
| 2hsbA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.55 | 38.0 | 3.77e-01 | 80.3% | 68.3% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 37.0 | 4.07e-01 | 96.7% | 87.5% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 33.0 | 3.64e-01 | 93.4% | 82.5% |
| 1vw4801 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.51 | 26.0 | 3.15e-01 | 96.7% | 76.7% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.51 | 30.0 | 3.62e-01 | 87.7% | 87.7% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 161426 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.84 | 73.0 | 6.42e-01 | 100.0% | 64.7% |
| 4944097 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.84 | 79.0 | 6.46e-01 | 100.0% | 64.8% |
| 5011113 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.84 | 74.0 | 6.40e-01 | 99.2% | 64.0% |
| 5047096 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.84 | 79.0 | 6.50e-01 | 100.0% | 60.0% |
| 4039998 | 131.1.1.9 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › YfbR-like | 0.83 | 79.0 | 6.58e-01 | 100.0% | 66.2% |
| 5024310 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.83 | 75.0 | 6.42e-01 | 98.4% | 63.9% |
| 4976483 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.83 | 78.0 | 6.54e-01 | 100.0% | 67.7% |
| 3386221 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.82 | 78.0 | 6.19e-01 | 100.0% | 60.4% |
| 4993560 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.82 | 77.0 | 6.61e-01 | 100.0% | 69.7% |
| 4955962 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.82 | 73.0 | 6.42e-01 | 97.5% | 67.5% |
| 3839885 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.82 | 77.0 | 6.27e-01 | 100.0% | 57.6% |
| 4990925 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.82 | 70.0 | 6.20e-01 | 98.4% | 64.7% |
| 4995646 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.82 | 73.0 | 6.29e-01 | 98.4% | 63.9% |
| 4979977 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.81 | 75.0 | 6.40e-01 | 97.5% | 65.4% |
| 392120 | 131.1.1.9 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › YfbR-like | 0.81 | 76.0 | 6.18e-01 | 99.2% | 59.2% |
| 1919141 | 131.1.1.9 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › YfbR-like | 0.81 | 76.0 | 6.38e-01 | 99.2% | 65.4% |
| 5067383 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.80 | 68.0 | 5.90e-01 | 97.5% | 62.3% |
| 5079110 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.79 | 75.0 | 6.31e-01 | 100.0% | 65.3% |
| 3389514 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.79 | 73.0 | 6.12e-01 | 100.0% | 62.1% |
| 5037823 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.79 | 70.0 | 6.14e-01 | 97.5% | 65.7% |
| 5065369 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.78 | 72.0 | 6.11e-01 | 100.0% | 62.6% |
| 4961926 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.78 | 73.0 | 6.04e-01 | 100.0% | 59.6% |
| 3971047 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.78 | 71.0 | 6.15e-01 | 100.0% | 65.6% |
| 5038604 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.77 | 70.0 | 6.04e-01 | 100.0% | 65.0% |
| 3791606 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.77 | 70.0 | 5.89e-01 | 100.0% | 60.8% |
| 3597759 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.77 | 72.0 | 6.00e-01 | 100.0% | 61.0% |
| 137236 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.75 | 67.0 | 5.65e-01 | 100.0% | 59.2% |
| 3999111 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.74 | 69.0 | 5.69e-01 | 100.0% | 68.9% |
| 3176815 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.74 | 69.0 | 5.61e-01 | 100.0% | 57.5% |
| 4974991 | 131.1.1.10 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 | 0.66 | 57.0 | 4.77e-01 | 96.7% | 56.5% |
| 3528431 | 633.21.1.24 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › PF25970 | 0.63 | 41.0 | 4.29e-01 | 95.9% | 70.4% |
| 3445025 | 174.1.1.2 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Jagunal | 0.60 | 37.0 | 3.42e-01 | 90.2% | 48.4% |
| 3726887 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.59 | 52.0 | 4.22e-01 | 95.1% | 51.6% |
| 3386345 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.57 | 38.0 | 4.31e-01 | 98.4% | 92.2% |
| 4361196 | 102.1.3.8 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain › Mab-21_C | 0.56 | 38.0 | 4.23e-01 | 93.4% | 88.4% |
| 5001331 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.54 | 38.0 | 3.98e-01 | 74.6% | 100.0% |
| 3998868 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 41.0 | 3.19e-01 | 82.8% | 75.3% |
D2
medium
residues 123-212
Domain cluster:
rep: MN988560.1__QIG77558.1__EVB61_252__00230__D1-81