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MN994275.1__QIA28820.1__X__00027

Bact-Vir

MN994275.1__QIA28820.1__X__00027

Identity

Accession:
MN994275 ↗
Kingdom:
phage

Quality

87.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Manuelvirus› Streptomyces_phage_JXY1

TaxID: 2708562

Cluster

View cluster (14 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 27-97
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fe7A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 60.0 5.15e-01 88.7% 56.9%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.70 53.0 3.77e-01 83.1% 36.5%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 49.0 4.97e-01 85.9% 75.7%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 46.0 4.89e-01 70.4% 79.4%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 48.0 5.26e-01 83.1% 92.9%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 46.0 5.12e-01 70.4% 89.3%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 4.76e-01 77.5% 70.7%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 48.0 3.43e-01 74.6% 25.7%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 45.0 4.62e-01 70.4% 71.4%
3m8jA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 43.0 4.02e-01 70.4% 52.2%
2p6rA03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.66 50.0 3.59e-01 83.1% 35.3%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 5.01e-01 81.7% 83.6%
3kkcA01 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 58.0 4.37e-01 100.0% 91.8%
3f1bA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 53.0 4.08e-01 95.8% 48.6%
4mk6A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 56.0 4.21e-01 100.0% 73.4%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 4.38e-01 77.5% 64.0%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 43.0 4.04e-01 71.8% 56.3%
4hkuB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 51.0 3.99e-01 93.0% 63.0%
3f0cA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 42.0 4.78e-01 74.6% 100.0%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.00e-01 84.5% 51.2%
2uxwA02 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.62 47.0 3.97e-01 81.7% 64.5%
2rekA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 53.0 4.10e-01 100.0% 95.9%
3egqA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 49.0 3.84e-01 91.5% 47.6%
3b81A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 48.0 3.65e-01 100.0% 85.2%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4954674 101.31.1.0 ↗ alpha arrays › HTH › Bacteriophage Sf6 terminase small subunit › Bacteriophage Sf6 terminase small subunit 0.84 73.0 6.31e-01 94.4% 68.6%
5063318 101.1.6.12 ↗ alpha arrays › HTH › HTH › TrpR › HTH_23 0.81 53.0 5.93e-01 77.5% 87.3%
4054648 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 53.0 5.88e-01 73.2% 89.1%
4949987 101.1.2.674 ↗ alpha arrays › HTH › HTH › winged helix domain › PF29648 0.76 51.0 5.93e-01 76.1% 98.0%
4943227 101.1.1.63 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.75 44.0 5.32e-01 73.2% 93.3%
5030780 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.75 49.0 5.63e-01 74.6% 96.0%
5053505 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.74 50.0 5.74e-01 81.7% 98.0%
5011873 4156.1.1.6 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.74 55.0 4.21e-01 80.3% 48.5%
5079108 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.73 51.0 4.62e-01 73.2% 56.8%
5012580 101.1.10.76 ↗ alpha arrays › HTH › HTH › Cyclin-like › HTH_23 0.72 51.0 4.30e-01 73.2% 47.0%
4008147 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.71 52.0 5.41e-01 76.1% 83.1%
4993585 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 55.0 5.90e-01 87.3% 100.0%
4952035 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.70 50.0 5.39e-01 80.3% 88.3%
3922335 101.1.1.221 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CCDC106 0.70 51.0 4.57e-01 77.5% 96.0%
4131887 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.69 48.0 4.69e-01 73.2% 67.1%
3981688 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.69 51.0 5.29e-01 77.5% 86.2%
3968864 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.68 47.0 4.69e-01 73.2% 69.3%
5037108 4156.1.1.6 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.67 53.0 4.16e-01 87.3% 52.9%
4973199 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.67 50.0 5.34e-01 85.9% 93.3%
4936653 4156.1.1.6 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.66 49.0 3.90e-01 78.9% 52.4%
1177545 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 44.0 4.54e-01 70.4% 73.5%
5031289 4156.1.1.6 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.65 52.0 4.13e-01 88.7% 54.0%
3979732 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 48.0 5.02e-01 80.3% 95.4%
4927990 4156.1.1.6 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.64 53.0 3.67e-01 93.0% 56.1%
5041503 4156.1.1.6 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.64 50.0 4.00e-01 88.7% 52.9%
4968115 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 44.0 4.44e-01 90.1% 78.6%
D2 high residues 102-334
PDB
Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267